Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3329 |
Symbol | |
ID | 4477630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3989883 |
End bp | 3991607 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639727939 |
Product | single-stranded-DNA-specific exonuclease RecJ |
Protein accession | YP_870959 |
Protein GI | 117921767 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCCATA AGATAGTCCG TCGTCCAACC GTTGATGATA GCCATTTACC CGCTCACCTT CCGCCGTTAT TAAGACAGCT TTACGCCCGC CGTGGTGTTA TGCCCAACGA GTGCGAGCTA GTGCTTAAAG GCCTGTTAAG ACCCGATACT ATGAAGGGCT TGGAGCTGGC CGCTAAGTTG ATTGCCGATG CGATGCAGCA GGAGAAGTCG ATATTGATCG TCGGTGATTT TGATGCCGAC GGCGCCACTT CAACCAGTGT GTGTTTGTTA GCACTGCGAA TGATGGGGGC GAGCAAGGTC GATTATTTGA TCCCCAATCG TTTCGACTAC GGTTATGGCC TAAGTCCTGA GATTGTCGCC GTGGCGGCAT CCAAACAGGC AGAATTACTT ATCACAGTAG ATAACGGCAT TTCCTCGATT GAGGGCGTAG CCGCCGCCAA GGCCTTTGGC ATGCAGGTGG TGATCACCGA CCATCACTTA CCCGGCCATG AGTTACCAGA TGCCGACGCC ATAGTGAATC CCAACCAGCC CGGTTGCCAG TTTGCCAGCA AATCGATTGC CGGCGTCGGG GTTGCCTTTT ATCTGATGAC GGCGCTTCGG GCTGAGCTGC GCGCTCGTCA TTGGTATCAA GCCCGCGGCA TTGCCGAGCC AAACCTTGGC ACTCTGCTGG ATATTGTTGC CCTTGGCACT GTGGCCGACG TGGTGTCGCT CGATGCCAAC AATCGTATTT TGGTCGAGGC GGGATTGGCG CGGGTACGCA GTGGTCGTTG TCGTGTGGGT ATTACCGCCT TACTCGAAGT GGCGAAACGT AATCCCGCTC GCATTGTCGC CTCGGACTTT GGTTTTGCCG TAGGCCCAAG GCTTAATGCC GCCGGCCGAC TGGATGAAAT GGCGCTTGGG GTTGAAACCC TGCTGTGCGA AGACATTATG TATGCAAGGC GGATGGCGGC AGAACTCGAT AGCCTCAACC AAGAGCGACG TGAGCTTGAG GTGGGGATGC AGCAAGAGGC GCTTAAAAGT CTTGAATATC TAAAGCTTAA TGAAGAGCAA CTTCCGTGGG GCATCGCCCT CTTTCAAGAG GATTGGCACC AAGGGGTTAT CGGTATTCTG GCCTCGCGAA TTAAAGATAA ATACCACAGA CCCGTTATCG CCTTTGCCGA CGCGGGGAAT GGCGAAATTA AAGGCTCGGC GCGCTCCATC AAAGGTTTGC ATATGCGGGA TCTGCTGGAG TTGGTTAACT CCCGCCATCC AGGGCTTATC AGCAAATTTG GCGGCCATGC AATGGCGGCA GGCTTAACCT TAAAGTCCGG CGGCTTCGCA ACCTTTGCCA AAGCCTATGA TGATGCGGTG CGTGAACTAT TAAAGCCTGA GCAGCTGACG GGTGAGCTGT GGTCCGATGG CGAATTAACG CCGACGGAAC TTACCCTCGA AATTGCTCAG TTACTTCGTA ATGCGGGGCC TTGGGGTCAG TCCTTCGAGG AGCCATTATT CGATGGCTAT TTTAAGATTA TCCAGCAGCG AATAGTGGGG GAGCGCCACC TTAAATTAGT GCTTGAAACC CCATGCAGTA CTGTGATGTT AGACGCGATT GCCTTTAACG TGGATTTACA CACTTGGCCC GATGCGACAA TTCAGCATGC GCGCATCGTT TATAAGCTGG ATGTGAACGA ATATCGCGGT AATTTCACCC TGCAGTTGAT GGTCGAGCAA ATCGAGCCAA TGTAG
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Protein sequence | MIHKIVRRPT VDDSHLPAHL PPLLRQLYAR RGVMPNECEL VLKGLLRPDT MKGLELAAKL IADAMQQEKS ILIVGDFDAD GATSTSVCLL ALRMMGASKV DYLIPNRFDY GYGLSPEIVA VAASKQAELL ITVDNGISSI EGVAAAKAFG MQVVITDHHL PGHELPDADA IVNPNQPGCQ FASKSIAGVG VAFYLMTALR AELRARHWYQ ARGIAEPNLG TLLDIVALGT VADVVSLDAN NRILVEAGLA RVRSGRCRVG ITALLEVAKR NPARIVASDF GFAVGPRLNA AGRLDEMALG VETLLCEDIM YARRMAAELD SLNQERRELE VGMQQEALKS LEYLKLNEEQ LPWGIALFQE DWHQGVIGIL ASRIKDKYHR PVIAFADAGN GEIKGSARSI KGLHMRDLLE LVNSRHPGLI SKFGGHAMAA GLTLKSGGFA TFAKAYDDAV RELLKPEQLT GELWSDGELT PTELTLEIAQ LLRNAGPWGQ SFEEPLFDGY FKIIQQRIVG ERHLKLVLET PCSTVMLDAI AFNVDLHTWP DATIQHARIV YKLDVNEYRG NFTLQLMVEQ IEPM
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