Gene Shewana3_3308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3308 
Symbol 
ID4477609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3969838 
End bp3971067 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content48% 
IMG OID639727918 
ProductATPase domain-containing protein 
Protein accessionYP_870938 
Protein GI117921746 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTC AGTTCTACCG CTTGTTTATC TTTTTACTGC TGTCCTGCGG AATCGTGATC 
TGGAGCTTTG GTCAGCTCGC CGAGCATTTC GCCCACGACG AATACAACTA CCAAATCGAC
GTCGACGACC TACTGCAAAA TTATGATGAG CAACTACCTA AGATAAAGCG CATTCCCGTT
GCCTCTCTCT CGCTGCCAGA AAATTTGCAA TCCTCACTGC AACTGGGGGC GACAATCGCC
CTGCGCCATA GCAGTAATGA GCTCTATTAT TATCGCCTCG ATAAGGATAG CAGCCATATC
TTAGTGCTAG GCCCAGTGCA AACACCTGTG CCGAAGGAGC GCAATACCAG TTTGATTTTA
TTGGGATTAT ACTCATCACT CTGCTTGGTT GCCCTCTGGT GGATTTGGCC GGTATTTCGG
GATCTTAACC ATTTGCAGCA GGCCGCTATC GAATTTGGCC AAGCCCCGCG TAAACGACCT
CAGGATATCC ATAAACACTC GGCAATTTTC CCGCTTGCTA AGGCTTTTAA CAGTGTTAGC
CACCAAATCG TCGACTTTAT CCAGATGCAC AAGGAGCTGT CCCGCACCAT CTCCCACGAG
GTACGCACGC CTCTTGCGCG AATGCGCTTT GCACTGGAAA TTATTCGGCC ACAAATCGAT
GCTAATTACG CTAACCGCTT AAATGAAGAT ATCGATGATA TTGAACAACT TGCAGCAAAT
TATCTGTCTT TTGCTCGCCT AGAGCATAAG GAAGAAACCC TCAGCCAAGA ATCACAATCC
ATTGAATTAT TTATGGAAAA ATTGGCCCAC AAATATGCTA TCTACCAGCC TAAGTTTAAT
ATTGTGTTTC ACTATGAGGC GCAGCAGGCC CACTTCGACC CGATTGCGAT GACGATTGCG
ATTCAAAACC TTGTCCAAAA TGCTATGCGT TTCGCCCAGC ATGACATCCA TGTCCACTTC
CATCAGCAAC GAGGCATAAA TCGGATCAGC GTCGAGGATG ATGGTCCGGG ATTTGAAGGC
AAAGGCAAAA AACTGGTAGC AGCCTTCGAG CGGGATAGCC AGCAGAGCGA TACTAGTGGC
TATGGTTTAG GGCTGTATAT CGTCAAGAAA ATCGCCACTT GGCATTATGG CACGCTAGAG
TTAAGCCGCT CACAGGCCCT AGGCGGCGCC GAAATCAGCA TTAGCTGGGA CGATGCCTTA
ACGCCTAAAG CCGAAACTGA CGCCGAGTAA
 
Protein sequence
MKFQFYRLFI FLLLSCGIVI WSFGQLAEHF AHDEYNYQID VDDLLQNYDE QLPKIKRIPV 
ASLSLPENLQ SSLQLGATIA LRHSSNELYY YRLDKDSSHI LVLGPVQTPV PKERNTSLIL
LGLYSSLCLV ALWWIWPVFR DLNHLQQAAI EFGQAPRKRP QDIHKHSAIF PLAKAFNSVS
HQIVDFIQMH KELSRTISHE VRTPLARMRF ALEIIRPQID ANYANRLNED IDDIEQLAAN
YLSFARLEHK EETLSQESQS IELFMEKLAH KYAIYQPKFN IVFHYEAQQA HFDPIAMTIA
IQNLVQNAMR FAQHDIHVHF HQQRGINRIS VEDDGPGFEG KGKKLVAAFE RDSQQSDTSG
YGLGLYIVKK IATWHYGTLE LSRSQALGGA EISISWDDAL TPKAETDAE