| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3232 |
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| Symbol | |
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| ID | 4477341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3876006 |
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| End bp | 3877862 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639727842 |
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| Product | lipid ABC transporter ATPase/inner membrane protein |
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| Protein accession | YP_870862 |
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| Protein GI | 117921670 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.012084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACAAAC AGGTAACCGA GACTACAGAA TCGAGTACAC TTCCCCCACG ATCATTATCA
GAGTCCACTA TGTCTCACAA CGCTGCTAAC TCTTCGATCC GCCAACGGGC GGTATTGCCT
TGGATTTGGC AATTTCTTAA GCCCTATCGC CTGCGGGTGG TGGCGGCGAT TGTATTTCTG
TTGATTGGCT CCTTGGCCTG GCTATCCCTC GGGCAAGGCG TGCGGCTGAT GGTGGACGAA
GGTTTTATTA AGGATAACGC CCAGCGTCTC AATGAAATTA TTCTGTTAGT GCTGCTGATC
ACCGCCGTGA GTGGCACAGC GGTGTTTTGC CGTTTTTATC TGATGACTTG GCTCGGCGAG
CGGGTCAGCG CCGATATAAG GCTGACGGTT TACAATCAAC TGCTTAAGTT GTCTCCGGCT
TTTTATGCCA AGGTGCGTAC CGGTGAGGTG ATTTCGCGCT TTACCGCCGA CTCGACTCTG
CTGCAAACCG TGGTCGGCTC GAGTCTGTCG ATGGCGCTGC GCTCCGGCGT GACTGTGATC
GGCGGGCTGG CGATGATGGG GATCACTAGC GTGAAGATGA CGCTGCTCGT GCTACTGGCC
GTGCCTCTGG TGCTGGGGCC TGTCGGTTTC TTTGGCCGAA AAGTGCGAAC CTTAGCGCGG
GAGAGTCAAG ATAGGGTGGC GGATTTGGGA GCCTATGTGG ATGAAACCTT ACATGAAATC
CATACAGTGC AAGCCTATGG TCATGAGGAT AAGGACCGCA GTTTGTTCAA TGGTCGTGTC
GAAGATGTGA TGATCGCCGC CAGTGGTCGT ATTCGCTATC GCGCCATGTT GATTTCCTCC
GTGATGTTTT TAAGTATTGC CGCCATAGCA TCTGTGACTT GGGTCGGCGC CCACGATGTG
ATGTCGGGTA AGATGACGGG CGGTGAACTC TCGGCCTTTA TGTTTTATGC CGTGATGGTG
GCAGGCGCCG TCGCCACCAT TAGTGAAGTC GTGGGTGAGA TCCAACGCGC CTCGGGCGCC
GCTGAACGCT TAATCGAATT GGCTGAAACT GAAGTCGATA TTCCTGCGCC ACTGGAGCCT
AAAACGCTGC CCGCGAAAGT GCGTGGCGAG CTGCAACTGC AACAGCTGAA CTTCCATTAT
CCCGAGCAAA CTCAGTTAGT GCTCCGCGAC TTAGAACTGA CTATTACTGC GGGTGAGCGG
GTGGCCTTGG TCGGGCCGAG TGGGGCCGGC AAGAGTACCC TGTTTCAGTT ATTGCAGCGG
TTTTATGTGC CGTCATCGGG CAGTATTCAT TTGGATGGGA TTGATATTGC TGAGCTTTCA
CCAAAGGATT TACGGGCGCA ATTTGCGCTT GTACCGCAGG ACTCAGTGAT TTTTGCCACC
AGTGTATTGG AGAACGTACG CTATGGCCGC GTCGATGCCA GCGAGCAGGA AGTGATTGAT
GCTTGTATCG CAGCCCGTGC CCATGAGTTT ATCAGTGAGT TTAGTGAAGG TTATCAAACC
TATTTGGGTG AGCGCGGCGT GCGCTTATCC GGTGGTCAAA AGCAGCGTAT CGCGATTGCG
AGGGTCATTT TAGCCGACAG GCCTATCTTG CTGCTCGACG AGGCGACCAG CGCGCTCGAT
GCCTTAAGTG AGCAAAAAGT GAAGCTGGCA CTCGATGAAT TGATGAAGGG GAAAACCACG
CTTATCATCG CCCATCGCCT CGCCACAGTG ATCAATGCGG ACCGAATTAT CGTGTTCGAT
AAAGGGCGTA TCGTCGCCAG TGGTAAGCAT CAAACTCTTA TACAAACCAA TGCCCTATAT
CGCGAGTTTG CCAGTTTGCA GCTGCTCACG GATGAAGTGA GTGCGCTGAG CGAGTAA
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| Protein sequence | MNKQVTETTE SSTLPPRSLS ESTMSHNAAN SSIRQRAVLP WIWQFLKPYR LRVVAAIVFL
LIGSLAWLSL GQGVRLMVDE GFIKDNAQRL NEIILLVLLI TAVSGTAVFC RFYLMTWLGE
RVSADIRLTV YNQLLKLSPA FYAKVRTGEV ISRFTADSTL LQTVVGSSLS MALRSGVTVI
GGLAMMGITS VKMTLLVLLA VPLVLGPVGF FGRKVRTLAR ESQDRVADLG AYVDETLHEI
HTVQAYGHED KDRSLFNGRV EDVMIAASGR IRYRAMLISS VMFLSIAAIA SVTWVGAHDV
MSGKMTGGEL SAFMFYAVMV AGAVATISEV VGEIQRASGA AERLIELAET EVDIPAPLEP
KTLPAKVRGE LQLQQLNFHY PEQTQLVLRD LELTITAGER VALVGPSGAG KSTLFQLLQR
FYVPSSGSIH LDGIDIAELS PKDLRAQFAL VPQDSVIFAT SVLENVRYGR VDASEQEVID
ACIAARAHEF ISEFSEGYQT YLGERGVRLS GGQKQRIAIA RVILADRPIL LLDEATSALD
ALSEQKVKLA LDELMKGKTT LIIAHRLATV INADRIIVFD KGRIVASGKH QTLIQTNALY
REFASLQLLT DEVSALSE
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