| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3227 |
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| Symbol | |
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| ID | 4477336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3869605 |
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| End bp | 3871071 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639727837 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_870857 |
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| Protein GI | 117921665 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.539563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCAA TAGAGCCCAC CGCAATGCCC TTAGATAAAC ATTTTCTGCC CGAAAATCAG
TTACTGCTTA ATGCCGTGGG TGAAGGTATT TATGGGTTTG ATTTAAAGGG TAATGCTGTC
TTTATCAATC CCGCCGCCGA GCGCATGACG GGCTGGAAAA ATGAAGAGTT ACTCGGCAAA
AATATCCATA ATTGCCATCA TCATAGCCAC GCGGATGGTA GTCATTATCC GCAGGAAGAT
TGCCCCATCT ACAATACGTT AAAAGATGGG ATAGCAAGGG AAATTACCCA CGATGTATTC
TGGCGCAAAG ATGGTAGCAG CTTTCCAGTG TATTACAGCT CTACGCCCGT CTATCGGGAT
AACAAGCTTA TCGGAGTAGT CGCGATATTT CGCGATATTA GTATTCAGAA ACAAACCGAG
CAGTCGCTAC GCCAAGCTTT GGCGCAGGTT CAGGCTCTGT CGGAGCAACT TGCCAGCGAG
AATCACTATC TCCAGGCCGA GTTAGCCGAT AAGACCGGCG ATGTGGATAT TTCGGGCAGT
AGCGCGGTGA TCCGCCATAT GATCCAGCAA TTGCATATGG TGGCTAATAC CGATAGTACT
GTACTGATCT GTGGCGAGAA TGGCACAGGC AAAGAACTGG TTGCCCGTAA TTTACATCAA
CTGAGTCGCC GTAAAGATAA ACCCATGATC AGCGTTAACT GCGCGGCGTT TTCAGCCTCA
CTGCTAGAGA GTGAGTTGTT TGGCCATGAG AAAGGCGCCT TTACCGGTGC AACTCAGCAA
CGCAAGGGCC GCTTCGAGCT CGCCCATCAA GGCACACTGT TTCTCGATGA GGTGGCCGAA
TTAAGTTTAG AGGCGCAATC TAAGTTACTG CGGGTGATCC AAGAGCAATC CTTTGAACGA
CTCGGCGGCA GCGAAACCAT CAAGGTCGAT ATTCGCTTAG TCGCCGCCAG CCACCATGAT
TTACTCAAGC GCGTTGAACA GGGCTTATTC AGGATGGATC TCTATTACCG CTTGAATGTC
TTCCCAATTC AAGTGCCGCC GCTGAGGGCA AGGCTTGAAG ATATGCCCGA GCTTGTCAGC
CACATTTTGC ATTCCCTAAA CCGCAAACTC GGTAAGAAAC TGCGCGGCGT AAGCCAAAAA
GGTCTGCAAA AACTGATGGC CTACAGCTGG CCTGGCAATG TGCGCGAATT ACAAAATATC
CTCGAACGGG AGGCCATTTT ATCCCAAACG GATATTCTAC AAATCCATGC CATGCCTACG
CATCACCTAC AGACTCAAAC CGCAGCTTCG CCATTACAAA CCTTGGCCGA GGCGGAAGCG
CAACATATAG AACAAACATT AAAGCAGCTC AACTGGCGTA TTTCAGGCCC CAATGGGGCG
GCCAATGTGC TCGGCGTTCC GCCAAGTACA CTCAGATCGC GGATGAAGAA ACTCGGGATT
ACACGCCAAA CCCCTGCAGA AGAATAG
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| Protein sequence | MTSIEPTAMP LDKHFLPENQ LLLNAVGEGI YGFDLKGNAV FINPAAERMT GWKNEELLGK
NIHNCHHHSH ADGSHYPQED CPIYNTLKDG IAREITHDVF WRKDGSSFPV YYSSTPVYRD
NKLIGVVAIF RDISIQKQTE QSLRQALAQV QALSEQLASE NHYLQAELAD KTGDVDISGS
SAVIRHMIQQ LHMVANTDST VLICGENGTG KELVARNLHQ LSRRKDKPMI SVNCAAFSAS
LLESELFGHE KGAFTGATQQ RKGRFELAHQ GTLFLDEVAE LSLEAQSKLL RVIQEQSFER
LGGSETIKVD IRLVAASHHD LLKRVEQGLF RMDLYYRLNV FPIQVPPLRA RLEDMPELVS
HILHSLNRKL GKKLRGVSQK GLQKLMAYSW PGNVRELQNI LEREAILSQT DILQIHAMPT
HHLQTQTAAS PLQTLAEAEA QHIEQTLKQL NWRISGPNGA ANVLGVPPST LRSRMKKLGI
TRQTPAEE
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