Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3216 |
Symbol | |
ID | 4477308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3859813 |
End bp | 3860574 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639727826 |
Product | hypothetical protein |
Protein accession | YP_870846 |
Protein GI | 117921654 |
COG category | [S] Function unknown |
COG ID | [COG2966] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00414919 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTACGCAG ATACTCAAAA TGATATTACT CGGCAGGTTG TGCGTGTCGC ACAACTGCTA CTGGCCTACG GTGCTGAATC TGATTTAGTT GAAGAAATCA GTCAGCGCCT AGGTCAGGCC TTAGGATTGG CAAGTGTTGA GCTTTCCATC TCCTCTAATT CCCTCGTGTT AACCAGTTTA GTGCATGGTC GCTGTATCAC GACGACGCGT CGGATCCGCG AGCATGGCAT CAATATGACC ATAGTCTGCG AGTTACAGCG CATCTGTTTA TTGACGGAAA AAGGTCTCTA TGGCCCCAAC GAAGTGCGTA AACGCTTAGC GCGAATCGAA CCTAAGACCT ACCCGCCGTA TCTCGTGATC TTGATGATAG GCCTGTCCTG CGCAAGCTTC TGTCATCTAT TTAATGGCGA TGTCGCCGCA TCAATCATCA CTTTTTTTGC CTCTGCAGTA GGGATGTCGG TGCGCCTTGC GATCGCCAAG CGGCATTTTA ATTTGCTGGT TAATTTTGCG GTGACGGCAT TTGTCACTAG CTTATTGGCG CAGACGGGTT ATGTGTTTAA CTTGAGTGAG ACCCCGCAGG CGGCCATGGC GGCCAGTGTG TTGATGTTGG TGCCGGGGTT TCCGATGATC AATGCGATTT CTGATATGGT CAAAGGCCAT ATGAACGTGG GGATTTCCCG CTGGGGCCAT GCCACCTTGC TTACTGTGTC GTCCGTTATT GGCATTACGA TTGCGATGCA GCTAGGGGGG ATCTTCCTAT GA
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Protein sequence | MYADTQNDIT RQVVRVAQLL LAYGAESDLV EEISQRLGQA LGLASVELSI SSNSLVLTSL VHGRCITTTR RIREHGINMT IVCELQRICL LTEKGLYGPN EVRKRLARIE PKTYPPYLVI LMIGLSCASF CHLFNGDVAA SIITFFASAV GMSVRLAIAK RHFNLLVNFA VTAFVTSLLA QTGYVFNLSE TPQAAMAASV LMLVPGFPMI NAISDMVKGH MNVGISRWGH ATLLTVSSVI GITIAMQLGG IFL
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