Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3208 |
Symbol | pdxA |
ID | 4478271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3852649 |
End bp | 3853635 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639727818 |
Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
Protein accession | YP_870838 |
Protein GI | 117921646 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.132528 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.865126 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCACTA AACGTATTGC CGTTACCCCC GGAGAACCTG CGGGTATCGG CCCCGATTTA GTCGTGCAAC TCGCTCAGCA GGCTTGGCCT GCTGAGTTAG TCGTTTGTGC GGATCCCGAA TTATTAGCCA GCCGAGCAAA ACGACTCGGC CTGTCTGTTA CTTTTCGCCC TTACCTGCCC GAGCAACCGC CTAAACCGCA GGAAGCAGGC ACGCTCACCA TTGCGCCTTT CAAACTGGTG ACCGACGCCG TTTGCGGCCA GCTCGATGAG CAAAACAGTG CCTACGTAGT TGAAACCCTG CGTTATGCGG GTGAGAAAAA CATGAGCGGC GAGTTTGATG CCGTGGTTAC TGGCCCAGTC CATAAAGGGA TCATCAACCA AGCGGGGATT TCCTTTAGCG GCCATACCGA GTTTTTTGCC CATCAGGCCA ACTGCCCCGA TGTGGTCATG ATGTTAGCGA CTCAAGGTTT ACAGGTGGCA CTGGTGACCA CCCATATTCC ACTGGCCTAT GTGGCAAAAG CCATTACGCG CCAGCGTTTG CATCATATTA TTAAGATTTT ACACGCTGAT CTTATCAGCA AGTTTGCCAT TGCTTCCCCT AAAATTTATG TCTGTGGCTT AAACCCACAC GCGGGTGAAG ACGGCCACCT TGGCCGGGAA GAAATCGATG TGATTATTCC GGCACTGAAC GAACTGCGTG AAGAGTATCA AATGAACATT GTCGGCCCTC TACCCGCCGA TACCCTGTTC CAACCTAAAT ATTTACAGGA CGCGGATGTC GTGTTGGCCA TGTACCATGA CCAAGGCTTA CCCGTTCTAA AGTCACAGGG ATTTGGCAAA TCGGTAAACA TTACCTTAGG TTTACCTTAT ATCCGTACCT CGGTTGACCA TGGTACGGCG CTCGATCTTG CGGGAACTGG CAAAGCCGAT ATTGGCAGTT TTGTCTGCGC CTTGAATAAA GCCATTGAGT TATCCTCAAA AAACTAA
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Protein sequence | MTTKRIAVTP GEPAGIGPDL VVQLAQQAWP AELVVCADPE LLASRAKRLG LSVTFRPYLP EQPPKPQEAG TLTIAPFKLV TDAVCGQLDE QNSAYVVETL RYAGEKNMSG EFDAVVTGPV HKGIINQAGI SFSGHTEFFA HQANCPDVVM MLATQGLQVA LVTTHIPLAY VAKAITRQRL HHIIKILHAD LISKFAIASP KIYVCGLNPH AGEDGHLGRE EIDVIIPALN ELREEYQMNI VGPLPADTLF QPKYLQDADV VLAMYHDQGL PVLKSQGFGK SVNITLGLPY IRTSVDHGTA LDLAGTGKAD IGSFVCALNK AIELSSKN
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