Gene Shewana3_3187 details

Gene Information

• Locus tag: Shewana3_3187
• ID: 4478250
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella sp. ANA-3
• Kingdom: Bacteria
• Replicon accession: NC_008577
• Strand: +
• Start bp: 3825284
• End bp: 3825820
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 639727797
• Product: hypothetical protein
• Protein accession: YP_870817
• Protein GI: 117921625

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00707615
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 0.59429
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGATACA AAAATATCGC CAGTCTGTTT GTCGCCTTGG TCTTCGTCAG CGGCTGCAGC 
AGTAAGCCGA AAAATGATTA CGATCTCAAT TACGACTTTA AGGCATTACA GAGCTTCACC 
CAGCTCGCTC CCCAGCCCAG CGACGACCCA CTCAGCGCCC AGCGCATTCA AACCGAAATC 
ACCCAGCAAT TAAGCCAAAA GGGCTTTACT GAAAATGCCT CTTCCCCCGA TTTTAAAGTC 
GCCTATGGCT TACTGACCCA AGACAAGCCC AAAGACTCAG GCCTATCCAT AGGCTTAGGC 
ACGGGCAGTT TCGGCCGCTC TGGCGGCATT GGCGTAGGTA CAAGCGTCGG CGTGCCGCTT 
GGCAGTGATA CGGCAAAAAT CCAAACTATT CAAATTGATA TTATCGACAC TAAAACCAAT 
AAGCTGATTT GGCGCGGCAC AGATAGTTTC GATTTTGATG GCGGCGGCGA TAAAAAAGCT 
CAAGACACAG CCAAAGCCGT TAGCCGGATT TTGGCGCAGT TTCCACCGCA GCCATAG 

 

Protein sequence

MGYKNIASLF VALVFVSGCS SKPKNDYDLN YDFKALQSFT QLAPQPSDDP LSAQRIQTEI 
TQQLSQKGFT ENASSPDFKV AYGLLTQDKP KDSGLSIGLG TGSFGRSGGI GVGTSVGVPL 
GSDTAKIQTI QIDIIDTKTN KLIWRGTDSF DFDGGGDKKA QDTAKAVSRI LAQFPPQP