| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3182 |
|---|
| Symbol | |
|---|
| ID | 4478245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 3821466 |
|---|
| End bp | 3822380 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639727792 |
|---|
| Product | MltA-interacting MipA family protein |
|---|
| Protein accession | YP_870812 |
|---|
| Protein GI | 117921620 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3713] Outer membrane protein V |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0446172 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAATCT GTTGCCTATT ATCGACAGAC ATTAAACCCG AACGCAAAAT CATGTATCGA
ATTCTATTTA TCTTACTCGC CGCACTTAGC CTACCTTCAA TAGGAATGGC GAAAGAACCG
TGCGTCACTA AAGATGAATG TATTGAAATG CGTAACTGGG ATTTAGGGGT AGCGATCGGC
TGGGGACAGA AGACCAATCC ATTGCGAGAT TTTGATGATA TCCCAGTCTT CTTTATTCCC
ACCGTAGCTT ACTATGGTGA GCATTGGTTT TTTGATAATG GCAACTTGGG CTACAGTTTA
ACCGAGCAGA AGTACTTCAG CTTAAACTTA GTCACCAGTT ATAGCTTAGA TAGGGCCTAC
TTTTACCGTT GGGATCCGTC CAATATCTTC CTAAAACGCA GTTCACAGGA AGAGGCCAGA
CTGCTCTCAA CCAATACCGC CCTGAGCAGT GAGCCGGACC CCGTATTTAA CTCCTTAGAA
TCGCGCAACT TTACCATGCT CGGCGGCGCC GAAGCCTTTA TTTATAGCCC GTTAGGTGTA
GTGAGATTGG CCTATACCCA TGATATGTTT AATGTGCACC AAGGGTCTGA AGCGCAAATC
AAATGGACCT ATGGCTGGCA TTTAACGCGC TGGTTGATGG ATATGTCACT CGTATTCGAT
TGGAAGAGTA CGAATGTGGT CGACTATTAC TATGGTGTTC GCCCGAGTGA AAATGATTAT
TGGAGCCAAC ATTACCATGC CGATGCAGGT TGGAATAAAG GAATAGAAAT GACAGCCCGT
TATATCTTAA CTGATAACTG GGATATGCTG TTTGCGTTCC GCTACACACA ACTTGCAGAC
GAAATTGCCG CCAGCCCCTT GCTCGATCAA GACTATAGCA GCACATATTT TATTGGCGCA
ACGTATAGGT TCTGA
|
|---|
| Protein sequence | MLICCLLSTD IKPERKIMYR ILFILLAALS LPSIGMAKEP CVTKDECIEM RNWDLGVAIG
WGQKTNPLRD FDDIPVFFIP TVAYYGEHWF FDNGNLGYSL TEQKYFSLNL VTSYSLDRAY
FYRWDPSNIF LKRSSQEEAR LLSTNTALSS EPDPVFNSLE SRNFTMLGGA EAFIYSPLGV
VRLAYTHDMF NVHQGSEAQI KWTYGWHLTR WLMDMSLVFD WKSTNVVDYY YGVRPSENDY
WSQHYHADAG WNKGIEMTAR YILTDNWDML FAFRYTQLAD EIAASPLLDQ DYSSTYFIGA
TYRF
|
|---|
| |