Gene Shewana3_3158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3158 
Symbol 
ID4477752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3787678 
End bp3788295 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content49% 
IMG OID639727762 
Producthypothetical protein 
Protein accessionYP_870788 
Protein GI117921596 
COG category[S] Function unknown 
COG ID[COG4764] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.191231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGGC TTTCGACAAC TCTGCTATGT GCATCCATTG GTTTACTCTC TGGCTGCGCC 
ACTTCTCCGC CTAAATCTCC CGATAACCTT TGCGATATTT TTCAAGAGCA TCGTTCATGG
TACGAAGCCG CTAAGGACAC CCGTGATAAA TGGGGCGTGC CTGTGCATGT GCCACTGGCG
ATGATGTATC AAGAAAGCTC CTTCAAGCAT AATGCCGCGC CGCCAATGGA GTACTTCTTA
GGGTTTATTC CCATCGGTCG AGCCAGCGAT GCCTATGGTT ATGCACAGGC CAAAACCATG
ACCTGGGATG ATTATGTTCG CGAGACGGGA AACAGCTGGT CTTCGCGGAG TAATTTTGAT
GATGCTATGG ATTTTATGGG CTGGTTTATT TACAAGACTA ATAAAATCAA TGGCGTTTCC
AAGTGGGATG CGAGGGCGCA ATACCTCAAC TATCACGAAG GCTGGGGAGG CTATCGCCGC
GGGACTTATA AGTCTAAGGC GTGGCTGGTG AAAGTCGCGG CTAAGGTGGA TGACAGGGCT
AAGCGCTATG CGGCTCAGTA TAAAACCTGT CAGGAGGATC TAGATTCTTC TTGGTTGTGG
CGCTTATTCT TCAGCTAG
 
Protein sequence
MKWLSTTLLC ASIGLLSGCA TSPPKSPDNL CDIFQEHRSW YEAAKDTRDK WGVPVHVPLA 
MMYQESSFKH NAAPPMEYFL GFIPIGRASD AYGYAQAKTM TWDDYVRETG NSWSSRSNFD
DAMDFMGWFI YKTNKINGVS KWDARAQYLN YHEGWGGYRR GTYKSKAWLV KVAAKVDDRA
KRYAAQYKTC QEDLDSSWLW RLFFS