Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3155 |
Symbol | |
ID | 4477749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3784624 |
End bp | 3785115 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639727759 |
Product | phosphoribosylaminoimidazole carboxylase, catalytic subunit |
Protein accession | YP_870785 |
Protein GI | 117921593 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0258648 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.930298 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCCC TTGTTGCTGT TGTTATGGGT TCTAAGAGTG ATTGGCCCAC AATGGAAGCC GCCGCTGAGA TCATGGATAA ACTGCAAGTG CCTTACCATG TTGAAGTCGT ATCTGCCCAT AGAACGCCAG ATAAACTGAT GGAGTTTGCA GCCGGAGCCG CTGACCGTGG TTTTAAAATT ATTATCGGTG GTGCGGGCGG TGCTGCTCAC TTACCCGGTA TGATTGCCTC AAAAACTCGC TTACCCGTAT TAGGTGTACC AGTACAAAGC AAAGCGCTGT CGGGCATGGA TAGCTTACTG TCTATCGTGC AGATGCCAAA AGGCATTGCC GTTGGCACTC TGGCCATCGG AACCGCAGGT GCCTTTAACG CCGGTCTACT CGCCTGCCAA ATCTTAGCCA ATAACGATGC TGAACTTGCC GCACGTTTAG AAGCCTTTAG AGAAGAACAA ACCCGCGCAG TGCTGGACAA TCCCGACCCG AGGGAAGCCT AA
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Protein sequence | MQALVAVVMG SKSDWPTMEA AAEIMDKLQV PYHVEVVSAH RTPDKLMEFA AGAADRGFKI IIGGAGGAAH LPGMIASKTR LPVLGVPVQS KALSGMDSLL SIVQMPKGIA VGTLAIGTAG AFNAGLLACQ ILANNDAELA ARLEAFREEQ TRAVLDNPDP REA
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