Gene Shewana3_3136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3136 
SymbolileS 
ID4477730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3760691 
End bp3763513 
Gene Length2823 bp 
Protein Length940 aa 
Translation table11 
GC content49% 
IMG OID639727740 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_870766 
Protein GI117921574 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACT ATAAATTTAC TTTGAATTTG CCGGAAACTG AGTTTCCGAT GCGTGGTAAT 
TTGGCAAATC GCGAGCCAGA GATGTTAGAG CGCTGGACGA AAGACGGTCT GTATCAGCAG
ATCCGTGATA GCCGAATTGG CCGCACACCT TTTATTTTGC ATGACGGTCC ACCGTATGCG
AACGGCAGTA TTCATATTGG TCACTCAGTC AACAAAATTC TTAAGGACAT TATTGTTAAG
TCAAAAACCA TGTCAGGTTT TGACGCGCCT TATGTGCCTG GTTGGGATTG CCACGGTCTG
CCAATTGAAC TGAAAGTTGA GCAAAAAGTC GGTAAGCCTG GTCAAAAAAT TTCTGCGGCC
GAATTCCGTG AAGAATGCCG TAAATATGCC GCCGAGCAAG TCGATGGCCA ACGTGCCGAC
TTTATTCGTT TAGGCGTGCT AGGTGATTGG CAAAAGCCTT ATTTAACGAT GGACTTTGCT
ACCGAAGCCA ATATCGTACG CTCTTTATCT AAAGTGATTG AAAACGGTCA CTTACATAAA
GGTGTTAAGC CTGTTCATTG GTGTACAGAC TGTGGTTCAG CCCTTGCCGA AGCCGAAGTG
GAATACGAGG ATAAAACCTC TCCCGCTATC GATGTGGCCT TTACTGCGAC TGATAGCAAA
GCTTTAGCCG CTCAGTTTGG TGTAAGCGAT TACTCACATC CTGTGGCTAT GGTGATTTGG
ACTACCACCC CTTGGACGCT GCCAGCTAAC CGCGCGTTAT CTATCAGCCC TGAGCTGGAT
TACAGCTTGG TTGAATTTGC GAAAGAGGGC GCGACTCACG CAGTTATTCT GGCCGATGTG
TTAGTTGAGG CTTGTATGAC GCGTTACGGC GCCGAGAGCC ACAGCGTGTT AGGTAAAGTT
AAAGGCGTAG CACTTGAGCT GGTTCGCTTT AAGCATCCAT TCTTAGCCTT TGACGTACCT
GCGATTTTAG GCGACCACGT GACGACTGAC GCGGGTACGG GTGTGGTTCA CACTGCACCT
GGCCATGGTC AAGACGACTT CGTGGTAGGC CAAAAATACG GTTTAGAAGT AGCAAACCCT
GTTGGTGATA ACGGCGTTTA CAAACCAGAC ACTGAGTTTT TTGCTGGTCA ACACGTATTT
AAAGCAAACG ACAATGTGGT TGCACTGCTG AAAGAAAAAG GCGCGCTATT ACACCATGTT
GCGTACCGTC ACAGCTACCC ACACTGCTGG CGCCATAAAA CGCCCATTAT CTTCCGTGCT
ACGCCGCAAT GGTTTATCTC AATGGATAAC CAAAACCTGC GCAAGCAAGC ATTAAGCGAA
ATTGAGCAGA CTCAGTGGAT CCCTGACTGG GGCCAAAGCC GTATCGAGAA GATGGTTGAG
AATCGCCCTG ATTGGTGTAT CTCCCGTCAA CGTACTTGGG GCGTGCCAAT TACCTTATTC
GTACACCGCG AAACTGAAGA GCTGCACCCT GACAGCGTGT CGTTAATGGC ACGTGTAGCC
AACCGCATTG AGCAAGAAGG CATTCAAGCT TGGTGGGATC TCGATGCTGC CGAATTACTG
GGTGAAGAAG CAGAACAATA CCGCAAAGTG ACCGATACCT TAGACGTATG GTACGACTCA
GGTTCAACCT TTGCTTCTGT GGTAGGCGCG CGCCCAGAGT TTCATGGTCA TGGTGTCGAT
TTATACCTTG AAGGTAGCGA CCAACACCGT GGTTGGTTTA TGTCATCTCT GATGATTTCT
ACCGCTATGA CTGGCAAAGC ACCTTACAAG CAAGTGCTGA CCCACGGCTT TACCGTTGAT
GGTAAAGGTC GCAAGATGTC GAAATCTATC GGTAACGTTA TTGCGCCGCA GCAAGTCACC
AACAAGCTAG GTGCGGATAT TCTGCGTCTT TGGGTTGCTG CAACCGACTA CAGCGGTGAA
ATGACAGTAT CGGATGAAAT CTTAAACCGT AGCGCCGATG CTTATCGCCG TATTCGTAAC
ACCGCTCGTT TCTTACTGGC GAACCTTAAT GGCTTCGACC CTGCTAAGGA CTTAGTGGCT
GTAGAAGATA TGGTAGCGTT AGACCGCTGG GCGGTGCGAC GCGCGGCAGC ACTGCAGCAA
GAAATCATTG AAGCTTACGA GCAATATAAC TTCCATATTG TGACGCAAAA GCTGATGCAG
TTCTGCTCGG TTGAGCTAGG TAGCTTCTAC TTAGACATCA TCAAAGACCG TCAATATACA
GCTAAGCAAG AGGGCCATGC CCGCCGTAGC TGCCAATCTG CACTGTTCCA CATTGCTGAG
GCTATGGTGC GTTGGATTGC GCCAATCCTG AGCTTTACTG CCGATGAAGT GTGGCAATTA
CTGCCTGGTC AACGTGATGC TTATGTGTTT ACCCAAGAAT GGTACCAAGA TCTGCAATCT
ATCACTTTAG ATACTGATTT AAGTGATGCG TACTGGGAAA ATCTGCTGAC TGTGCGTAAC
GAAGTCAACA AGGTCATCGA GCAAGCGCGC CGCGATAAAC GTATTGGCGG CTCCTTAGAC
GCCGAAGTCA CGCTGTTTGC CGATGCTGCT TTAACTGAAC AGTTAACGCA TATTGGTGAT
GAGCTGCGTT TTGTCCTGTT AACTTCAGAA GCCAAAGTAT TGCCATTGGC AGATGCGACA
AGCGATGCCG TTGAAACTGA ATTGGCTTCA TTGAAGTTAG AGGTAAATGC AACAACAGCA
GAGAAATGCG AACGTTGTTG GCACCATAGG GAAGAAGTGG GCACGATTGA GGCTCACCCA
ACGCTGTGCC ATCGCTGCGT AACCAATATT GAAGGTGACG GCGAAGTTCG TCTGTTTGCG
TAA
 
Protein sequence
MSDYKFTLNL PETEFPMRGN LANREPEMLE RWTKDGLYQQ IRDSRIGRTP FILHDGPPYA 
NGSIHIGHSV NKILKDIIVK SKTMSGFDAP YVPGWDCHGL PIELKVEQKV GKPGQKISAA
EFREECRKYA AEQVDGQRAD FIRLGVLGDW QKPYLTMDFA TEANIVRSLS KVIENGHLHK
GVKPVHWCTD CGSALAEAEV EYEDKTSPAI DVAFTATDSK ALAAQFGVSD YSHPVAMVIW
TTTPWTLPAN RALSISPELD YSLVEFAKEG ATHAVILADV LVEACMTRYG AESHSVLGKV
KGVALELVRF KHPFLAFDVP AILGDHVTTD AGTGVVHTAP GHGQDDFVVG QKYGLEVANP
VGDNGVYKPD TEFFAGQHVF KANDNVVALL KEKGALLHHV AYRHSYPHCW RHKTPIIFRA
TPQWFISMDN QNLRKQALSE IEQTQWIPDW GQSRIEKMVE NRPDWCISRQ RTWGVPITLF
VHRETEELHP DSVSLMARVA NRIEQEGIQA WWDLDAAELL GEEAEQYRKV TDTLDVWYDS
GSTFASVVGA RPEFHGHGVD LYLEGSDQHR GWFMSSLMIS TAMTGKAPYK QVLTHGFTVD
GKGRKMSKSI GNVIAPQQVT NKLGADILRL WVAATDYSGE MTVSDEILNR SADAYRRIRN
TARFLLANLN GFDPAKDLVA VEDMVALDRW AVRRAAALQQ EIIEAYEQYN FHIVTQKLMQ
FCSVELGSFY LDIIKDRQYT AKQEGHARRS CQSALFHIAE AMVRWIAPIL SFTADEVWQL
LPGQRDAYVF TQEWYQDLQS ITLDTDLSDA YWENLLTVRN EVNKVIEQAR RDKRIGGSLD
AEVTLFADAA LTEQLTHIGD ELRFVLLTSE AKVLPLADAT SDAVETELAS LKLEVNATTA
EKCERCWHHR EEVGTIEAHP TLCHRCVTNI EGDGEVRLFA