Gene Shewana3_3123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3123 
Symbol 
ID4477717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3749095 
End bp3750384 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content44% 
IMG OID639727727 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_870753 
Protein GI117921561 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.570794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTACGA AACGAATCGT GATAGTAGGT GGTGGGGCGG CAGGTTTAGC GCTAGCCTCT 
AAATTAGGCC GCAAGATGGG CGGTAGTGAT GTCGTCGATG TTTGCTTAAT TGATAAAAGC
CCAATCCATA TTTGGAAGCC AAAATTACAC GAAGTAGCTG TTGGGGTTAT TGACCAGTCT
ATAGAGGGAT TGTTGTATAG AGATCATGGT CTTAAGAATG GTTATCGATA CATTCGTGGC
GAAATTGAGC AATGTGAACC CGATGCCAAA ACCATCCAAC TTGCTGCGGT TTATAGTGAC
TCTGGTGAAT TGCTGCTTGA GCCCCGTCAA ATTGAATACG ATTACTTAGT GCTAGCCTTA
GGCGGGGTCT CTAATAGTTT TAATACCTTA GGTGCTGAGA AACATTGTAT TTTCCTTGAT
AGTTTAGATA ACGCTAACTT ATTCCATCAA AAATTATTAG ATGCATTACT GCAACTCAAT
GAAACACAAG AGAAAGTCAG TATAGGTATT GTTGGCGCAG GTGCCACTGG TGTCGAATTA
GCCGCAGAGC TTCACCATGT TATTGAGTCG GTGAAAGAGT ATGGTTACCT CAATATCTCT
AAGCATCATC TTGATGTGCA TCTTATTGAA GCATCACCAA AAATTCTCCC ACAGTTACCC
GAACGTGTGA GTGCAAGAGC TCAAGCGGTA TTGGATAAAA TTGGCATCCG TTTGCATATC
GGGGTGCAGG TTAAAGAAGT CACCCGCGAT GGCTTTATTA CACAGGATGG TGACGTTATC
GAAGCGGGAC TTAAAGTGTG GGCGGCTGGT GTGAAAGGTC CAAAAGCGTT TCAAAACTTC
TCTAAATTAC CCATTACGCC TCGTAATCAA GTGGAAGTTG ATGCTTGTAT GCGAGTGAAA
GGCCATCAAG ATATTTATGC GCTTGGGGAT TGCGCTCTAT TAATTTTGGA GTCCGGCCAA
CCTGTGCCAC CGCGCGCTCA AGCGGCAGCG CAAATGGCGG ATACCTTGTA TGAGAATATT
GTGAACCGTT TGCAAGGGAA GGCGGAAAAA CCTTTTGTGT ATAAAGACTA TGGTTCTCTG
GTGTCTCTAA GTCGTTTTTC TGCGGTCGGT AATCTAATGG GGAATTTGCG TTCAGGGACT
TTCTTCGTGG AAGGTCATAT CGCAAGGATC ATGTATATTT CGTTATACCA AAGACACTTA
GCGAGCCTAT ATGGCTGGTT CTCCGCAATT ATTTATCGCA TTGCACAAAA GTTACTCAAA
TGGCAAAGGC CAAAGCTGAA ATTGCATTAA
 
Protein sequence
MATKRIVIVG GGAAGLALAS KLGRKMGGSD VVDVCLIDKS PIHIWKPKLH EVAVGVIDQS 
IEGLLYRDHG LKNGYRYIRG EIEQCEPDAK TIQLAAVYSD SGELLLEPRQ IEYDYLVLAL
GGVSNSFNTL GAEKHCIFLD SLDNANLFHQ KLLDALLQLN ETQEKVSIGI VGAGATGVEL
AAELHHVIES VKEYGYLNIS KHHLDVHLIE ASPKILPQLP ERVSARAQAV LDKIGIRLHI
GVQVKEVTRD GFITQDGDVI EAGLKVWAAG VKGPKAFQNF SKLPITPRNQ VEVDACMRVK
GHQDIYALGD CALLILESGQ PVPPRAQAAA QMADTLYENI VNRLQGKAEK PFVYKDYGSL
VSLSRFSAVG NLMGNLRSGT FFVEGHIARI MYISLYQRHL ASLYGWFSAI IYRIAQKLLK
WQRPKLKLH