Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3123 |
Symbol | |
ID | 4477717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3749095 |
End bp | 3750384 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639727727 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_870753 |
Protein GI | 117921561 |
COG category | [C] Energy production and conversion |
COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.570794 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGCTACGA AACGAATCGT GATAGTAGGT GGTGGGGCGG CAGGTTTAGC GCTAGCCTCT AAATTAGGCC GCAAGATGGG CGGTAGTGAT GTCGTCGATG TTTGCTTAAT TGATAAAAGC CCAATCCATA TTTGGAAGCC AAAATTACAC GAAGTAGCTG TTGGGGTTAT TGACCAGTCT ATAGAGGGAT TGTTGTATAG AGATCATGGT CTTAAGAATG GTTATCGATA CATTCGTGGC GAAATTGAGC AATGTGAACC CGATGCCAAA ACCATCCAAC TTGCTGCGGT TTATAGTGAC TCTGGTGAAT TGCTGCTTGA GCCCCGTCAA ATTGAATACG ATTACTTAGT GCTAGCCTTA GGCGGGGTCT CTAATAGTTT TAATACCTTA GGTGCTGAGA AACATTGTAT TTTCCTTGAT AGTTTAGATA ACGCTAACTT ATTCCATCAA AAATTATTAG ATGCATTACT GCAACTCAAT GAAACACAAG AGAAAGTCAG TATAGGTATT GTTGGCGCAG GTGCCACTGG TGTCGAATTA GCCGCAGAGC TTCACCATGT TATTGAGTCG GTGAAAGAGT ATGGTTACCT CAATATCTCT AAGCATCATC TTGATGTGCA TCTTATTGAA GCATCACCAA AAATTCTCCC ACAGTTACCC GAACGTGTGA GTGCAAGAGC TCAAGCGGTA TTGGATAAAA TTGGCATCCG TTTGCATATC GGGGTGCAGG TTAAAGAAGT CACCCGCGAT GGCTTTATTA CACAGGATGG TGACGTTATC GAAGCGGGAC TTAAAGTGTG GGCGGCTGGT GTGAAAGGTC CAAAAGCGTT TCAAAACTTC TCTAAATTAC CCATTACGCC TCGTAATCAA GTGGAAGTTG ATGCTTGTAT GCGAGTGAAA GGCCATCAAG ATATTTATGC GCTTGGGGAT TGCGCTCTAT TAATTTTGGA GTCCGGCCAA CCTGTGCCAC CGCGCGCTCA AGCGGCAGCG CAAATGGCGG ATACCTTGTA TGAGAATATT GTGAACCGTT TGCAAGGGAA GGCGGAAAAA CCTTTTGTGT ATAAAGACTA TGGTTCTCTG GTGTCTCTAA GTCGTTTTTC TGCGGTCGGT AATCTAATGG GGAATTTGCG TTCAGGGACT TTCTTCGTGG AAGGTCATAT CGCAAGGATC ATGTATATTT CGTTATACCA AAGACACTTA GCGAGCCTAT ATGGCTGGTT CTCCGCAATT ATTTATCGCA TTGCACAAAA GTTACTCAAA TGGCAAAGGC CAAAGCTGAA ATTGCATTAA
|
Protein sequence | MATKRIVIVG GGAAGLALAS KLGRKMGGSD VVDVCLIDKS PIHIWKPKLH EVAVGVIDQS IEGLLYRDHG LKNGYRYIRG EIEQCEPDAK TIQLAAVYSD SGELLLEPRQ IEYDYLVLAL GGVSNSFNTL GAEKHCIFLD SLDNANLFHQ KLLDALLQLN ETQEKVSIGI VGAGATGVEL AAELHHVIES VKEYGYLNIS KHHLDVHLIE ASPKILPQLP ERVSARAQAV LDKIGIRLHI GVQVKEVTRD GFITQDGDVI EAGLKVWAAG VKGPKAFQNF SKLPITPRNQ VEVDACMRVK GHQDIYALGD CALLILESGQ PVPPRAQAAA QMADTLYENI VNRLQGKAEK PFVYKDYGSL VSLSRFSAVG NLMGNLRSGT FFVEGHIARI MYISLYQRHL ASLYGWFSAI IYRIAQKLLK WQRPKLKLH
|
| |