Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3101 |
Symbol | |
ID | 4477817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3720060 |
End bp | 3721367 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639727705 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_870731 |
Protein GI | 117921539 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCA AACCTCCCGT TCATAGTGAA CAATATCCCC AGTCTTATTA TGTTGATACT GCAAAAGAAA TTTACGCCCA TCCCCAACTT GAGGGCAAGG TAAGCACCGA CGTATGCATT ATCGGCGGGG GGTTCAGCGG TATTAACACG GCTATCGAAC TGCGGCAAAA GGGCCTAAAC GTGGTGCTAC TCGAGGCCAA GCGCATAGGC TGGGGCGCCT CAGGGCGTAA TGGTGGCGAG CTGATCCGCG GTATTGGCCA TGATCCTGCG CAATTTATCA ATGAGATAGG CCAAGAAGGT GTGAGCGCCA TTGAACAGAT GGGCTTTGAG GCGGTAGAGA TTGTACGAAA TCGGATACAG ACACATCACA TCGATTGCGA CTTACAAATG GGCTATTGCG ATTTGGCGGT TAAACCTCGG CATATGCTCG AACTAGAACA AGAGTTCGAC CACCTTAAGC GCCTTGGATA TCAGCATGAA ATCAAGTTAT TAACTCAGTC TCAGCTCGGA GAAGTTATCG GCTCAGACTT TTACCAAGGC GCCCTAGTCG ACATGGGCAG CGGTCATTTA CATCCGCTGA ATTTGGCCTT GGGCGAGGCT CGTGTTGCCC GAGACTTGGG CGCTCAATTA TTTGAATACA GCGCCGCAGA AAAGATTATT CCTAGGGATA AACCGCGAGT ATTAACGGCA AAAGGCGAAG TGACTTGCCA ATATGTCGTG CTGGCGGGCA ACGCTTATAT AGGCCATAAA CTGAATAGCT ACATCGGCGG TAAAGTGCTG CCCGCAGGGA GCTACTTGCT TGCAACCGAG CCACTGACAG AAGTGCAATG CCAAAGCATT ATCCCGCAAA ATATGGCCTT TGCAGATATG CGAATCGCCT TAGATTACTT TCACTTATCG GCGGATAGAC GCTTACTCTT CGGCGGACTT TGTACGTATT CAGGCAAAGA TCCTAAGGAT ATTGAAGCAG CGCTCAGGCC GAACCTTGAG AAGGTATTCC CACAGTTAAA AGGCGTACGC ATAGATTACG AATGGGGCGG CATGATAGGC ATTGGCGCCA ACCGTATGCC GCAAATCGGT CGCCTCCCCG ATGCGAGCAA TATTTTTTAC GCCCAAGCCT ATGCAGGCCA CGGCGTAAAT GCCACCCATA TGGCGGCCAA ACTGCTCGCC GAAGCCATTT GTCAGCAGGC GGGATATTTT GATGTATTCG CCAAAATCAA GCATATGACC TTCCCCGGCG GCCCCACATT CCGCTCGCCT ATGCTGGCTG CGGGTATGCT GTACCACAGG TTTAAGGACT TATTCTGA
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Protein sequence | MTTKPPVHSE QYPQSYYVDT AKEIYAHPQL EGKVSTDVCI IGGGFSGINT AIELRQKGLN VVLLEAKRIG WGASGRNGGE LIRGIGHDPA QFINEIGQEG VSAIEQMGFE AVEIVRNRIQ THHIDCDLQM GYCDLAVKPR HMLELEQEFD HLKRLGYQHE IKLLTQSQLG EVIGSDFYQG ALVDMGSGHL HPLNLALGEA RVARDLGAQL FEYSAAEKII PRDKPRVLTA KGEVTCQYVV LAGNAYIGHK LNSYIGGKVL PAGSYLLATE PLTEVQCQSI IPQNMAFADM RIALDYFHLS ADRRLLFGGL CTYSGKDPKD IEAALRPNLE KVFPQLKGVR IDYEWGGMIG IGANRMPQIG RLPDASNIFY AQAYAGHGVN ATHMAAKLLA EAICQQAGYF DVFAKIKHMT FPGGPTFRSP MLAAGMLYHR FKDLF
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