Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3086 |
Symbol | |
ID | 4477801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3697709 |
End bp | 3699433 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639727689 |
Product | DNA primase |
Protein accession | YP_870716 |
Protein GI | 117921524 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000597352 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000480435 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAATAC CTCGTGATTT TATCAATGAG CTAATCGCTC GCACCGACAT TGTCGAGCTT ATCGACCGCA AGGTGCCCTT GAAAAAGGCG GGTAAAAACT ACTCGGCCTG TTGTCCTTTT CATAGCGAAA AATCACCTTC GTTTACCGTT AGCCGCGATA AACAGTTTTA TCATTGTTTT GGCTGCGGTG CCCACGGCAA CGCCATCGAT TTTGTGATGG AGTACGACAG ACTCGACTTT GTCGATGCCA TAGAAGATCT TGCCGGACAA CTGGGCTTAG AAGTCCCAAG GGAACAAGGC ACGGGTAAAC GCCAAGACGA TGGCCTAAGC CGTGATCTAT ACCAATTAAT GGAAGAAGCG AGCCGCTTTT TTCAAACTCA GTTAAGACAA CACCAAGACA AGCAAAAAGT CATCGACTAC CTCGCCTATC GCGGATTATC CGATGATATT GTTGAGCATT TTGGGATTGG TTTTGCGCCC GACGGTTGGG ATGGCTTATT AAGCCGCTAC CGACACAGTC AAGATGCACA GGATAAACTC CTGACCGCAG GCATGCTGAT CAGCAATGAC AGCGGTAAAA GATACGACAG ATTCCGTGAC CGCCTGATGT TTCCTATTCG CGACCGCCGT GGTCGTGTGA TTGGATTTGG TGGCAGAGTA TTGGGAGATG GCACCCCCAA GTACTTGAAT TCGCCAGAAA CGCCCATATT TCATAAGGGC AATGAACTCT ACGGCCTATA CGAGCTAAAA CAACGTCATC GCGATCCCGA TAAGGTACTG ATTGTCGAAG GCTATATGGA CGTGGTCGCC CTCGCCCAAT ATGGCGTGGA TTACGCGGTC GCCTCCCTTG GCACATCGAC GACGGCTGAA CAATTCCAAT TGTTGCTGCG TAGTGCTAAG GAAGTGATTT GTTGTTATGA CGGCGATAGA GCCGGTAATG AGGCCGCTTG GCGCGCCTTA GAAACTGCTT TACCCCTACT CAAACCAGGG GACAAAGTGC GTTTTATGTT TTTACCTCAA TCTGAAGATC CGGATTCAAT GGTTCGTAAG ATTGGTAAAG ACGCATTCGA GCAAATGATG GAAAGTGCCA TCACCCTGCC CGAATTTTTG TTTGATACAT TAGCGACAAA ATTTGGTACC GATAAAGGTA ACTTAGCCAA ACAAGCCTTT GGCCTAATTG AAAAAATTCA AGATACTGTG CTGCAAAACC TACTGCTTGA GAACTTAGCT CACAAGTTAG GCATGAACAG CTCAGACGAT ATGAAGAAAA AACTGGGTTT TAGTGTCAAA CAAACTAAGC CCACAGCATC AACGGGACTC AAAGGACGCG GTACACCATT GCGACTTGCC ATCGCCTTGT TAGTACAGCA TCCCGAGCTG GGAGTGGGAT TATCCCCACA ACCGGCATTA AACCATCTGC AAATGCCAGG CATCGACTTG CTGCCATTGC TGTTGGAATT AACACGAGAG CATAGGTTAA ACAGCGCACA ACTACTTGAG CAATTCAGAG ACAGCCCCCA CAGCGGGACG CTGCATAAAT TAGCCCAATG GGACCATCAA GTGGCGGATG AAAACCTGCT CGGAGAGTTT AAAAAAGCCC TGATTTGGCT GAACAATCAA TATATTGAGC AGCGATATCA GGAATTGAGT CTTAAACAGA CCCATACTAA AGAAGAATGG ATACAGCTGC AGAAGCTGAT CTTAGTCATG AAAGGACTAA ACTGA
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Protein sequence | MAIPRDFINE LIARTDIVEL IDRKVPLKKA GKNYSACCPF HSEKSPSFTV SRDKQFYHCF GCGAHGNAID FVMEYDRLDF VDAIEDLAGQ LGLEVPREQG TGKRQDDGLS RDLYQLMEEA SRFFQTQLRQ HQDKQKVIDY LAYRGLSDDI VEHFGIGFAP DGWDGLLSRY RHSQDAQDKL LTAGMLISND SGKRYDRFRD RLMFPIRDRR GRVIGFGGRV LGDGTPKYLN SPETPIFHKG NELYGLYELK QRHRDPDKVL IVEGYMDVVA LAQYGVDYAV ASLGTSTTAE QFQLLLRSAK EVICCYDGDR AGNEAAWRAL ETALPLLKPG DKVRFMFLPQ SEDPDSMVRK IGKDAFEQMM ESAITLPEFL FDTLATKFGT DKGNLAKQAF GLIEKIQDTV LQNLLLENLA HKLGMNSSDD MKKKLGFSVK QTKPTASTGL KGRGTPLRLA IALLVQHPEL GVGLSPQPAL NHLQMPGIDL LPLLLELTRE HRLNSAQLLE QFRDSPHSGT LHKLAQWDHQ VADENLLGEF KKALIWLNNQ YIEQRYQELS LKQTHTKEEW IQLQKLILVM KGLN
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