| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3075 |
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| Symbol | |
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| ID | 4477790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3687779 |
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| End bp | 3689467 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639727678 |
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| Product | peptidoglycan binding domain-containing protein |
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| Protein accession | YP_870705 |
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| Protein GI | 117921513 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0150062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000100576 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTACAAGG CCTTTTATGG ACTCAGTGAT AACCCTTTTT CGATTGCACC CAATCCCCAT
TATTTATTTT TGAGTGACAG GCACAGAGAG GCCTTAGCCC ATTTGACCTA TGGACTGGGA
GAAACTGGGG GCTTTGTGTT GTTGACGGGG GAGGTCGGCA CGGGGAAGAC GACAGTATCT
CGTTGTTTGC TTGGGCAATT ACCCGATCAT ACCGATACGG CTTTTATCTT AAATCCTTCG
CTGACGGAGT TGGAATTACT CGCCACACTC TGTGATGAAT TGAAGATTAG CTATGGTGAA
AACCCAACCC TTAAACAACT CACTGACCAT CTGAGTCGTT TTTTACTGGC CAATCATGAG
AAAGGCCGCA ATACGGTACT CATCATCGAT GAGGCGCAGC ATCTACGCGC CGAAGTGTTA
GAGCAGTTAA GGCTGCTCAC CAATCTCGAG ACTGACACGA AAAAACTGCT GCAGGTGATC
TTAATTGGTC AGCCCGAGCT GCAATTGTTG CTTAAACGGC AAGAGCTTAG ACAGTTAGCC
CAGCGTATTA CTGCCCGCTA TCATCTATTA CCTCTTAATG AAGATGAAAT CGCACTCTAT
GTGTTGCACC GTTTGCAGGT GGCAGGTCGT TTTGAACCGC TATTTACCCG TAAAGCGATT
AAAGTGCTGC ACAAATACAG TGGCGGTATT CCGCGGTTAA TTAACTTGCT GTGTGAACGT
GCTTTGATGG CGGGTTATGC ACAATCTAAG GTGCCAATCG ATCACCATAT GGTGAGACAA
GCGGCGGCCG AGGTGCTCGG GGAAGAAGAA CCACAGCCAA ATAAACTCTT GTGGCCGAGC
GCTATCGCGG CGGCATTGGT TGTGGCTTTC GGCGTGTCTT ATTGGTTATT TACCGAAAGC
CCAGCGGTTG CCAATGTGGT CAACTCGCCT GTGACACAAG CGAATCAAGC GACACCAGAA
GTGACTCAAG CATCGATTCA AGATAAGAGT ATTCAGCCGG AGCAAACATT GGCTGCAACC
CAGAGTGCGC CAGTGGCTAG CGAGCCGCAA ACCCTTGCCG CGCCGGATCC GAGTGTGCGG
GTGTTGCAGG AGGCTATTAA GCAAAGCCGC AGTATCGATA CCGCTTTTGC AGGCCTCTTT
AATGTGTGGG GTAAAGTCCC CTTTAAAGGC TTAACCGCGT GCCAGTCGGC GCTTGAACAA
GGGCTTTCCT GCTATCAACA GCAGGGCAAT TGGATGTCGC TCACACGACT CAATTATCCC
GCGGTTGTGT ATTTAGTGGA TGATAACCAA CAAGATTTTT ATGGCGCTGT GATAGCTGTC
GATGCTGATC AGCTATTGAT GCAGTTAGGC GAGCAGCAGC TTTGGGTCGA TAGAGCCTGG
TTCAATCAAC ATTTTAGCGG CACCTTTGAA ATTCTCTGGC AGGCGCCTAA CTTGCCTATG
CTGGAAATCA GTCAGAAGTC GAGTCCTGGG CAATTACAAT GGCTTGAAAA CGCCCTTGCC
CATGTGGCTA ATCGACCTTC GCGCCGGGTG TCTCAATTCG ATCTGAAATT AGAGAACGAT
CTGAAAGCTT TCCAAAGCCA ACATGGTTTA AAGGCCGATG GGATTGCAGG TAATCAAACC
TTAGTGAGAC TAAATTTGTA TTTAAGTGAT CAGGGACCGC GCCTCACCGA TAAGGGAGCG
CAGAGTTAA
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| Protein sequence | MYKAFYGLSD NPFSIAPNPH YLFLSDRHRE ALAHLTYGLG ETGGFVLLTG EVGTGKTTVS
RCLLGQLPDH TDTAFILNPS LTELELLATL CDELKISYGE NPTLKQLTDH LSRFLLANHE
KGRNTVLIID EAQHLRAEVL EQLRLLTNLE TDTKKLLQVI LIGQPELQLL LKRQELRQLA
QRITARYHLL PLNEDEIALY VLHRLQVAGR FEPLFTRKAI KVLHKYSGGI PRLINLLCER
ALMAGYAQSK VPIDHHMVRQ AAAEVLGEEE PQPNKLLWPS AIAAALVVAF GVSYWLFTES
PAVANVVNSP VTQANQATPE VTQASIQDKS IQPEQTLAAT QSAPVASEPQ TLAAPDPSVR
VLQEAIKQSR SIDTAFAGLF NVWGKVPFKG LTACQSALEQ GLSCYQQQGN WMSLTRLNYP
AVVYLVDDNQ QDFYGAVIAV DADQLLMQLG EQQLWVDRAW FNQHFSGTFE ILWQAPNLPM
LEISQKSSPG QLQWLENALA HVANRPSRRV SQFDLKLEND LKAFQSQHGL KADGIAGNQT
LVRLNLYLSD QGPRLTDKGA QS
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