| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3038 |
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| Symbol | nhaA |
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| ID | 4478581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3641862 |
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| End bp | 3643031 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639727642 |
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| Product | pH-dependent sodium/proton antiporter |
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| Protein accession | YP_870669 |
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| Protein GI | 117921477 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3004] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.474949 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAG CAATTAGAAA TTTTCTGAGC CAGGAATCGG CTGGCGGCAT CCTGTTATTG
GTTGCTGTTG TCTTAGCCAT GCTCATGGCC AATTCTCCTC TAGCGGGACT CTATCAAGGT
TTTCTCGGTA CTGAAGTACA AGTGCGTGTC GGCGCGCTCG ATCTGCATAA GCCGCTGTTA
CTGTGGATTA ACGATGGCCT GATGGCATTG TTTTTCTTAC TGATTGGCTT AGAGGTGAAG
CGTGAACTGT TAGAAGGCGC CTTATCCAGT GTCGCTCAGG CCTCACTGCC AACCTTCGCT
GCGATTGGTG GTATGTTAGT GCCTGCTGGC ATCTATCTGC TATTTAACTA TGGCGATCCT
GTGACCCAAG TGGGTTGGGC CATTCCTGCG GCTACCGATA TTGCGTTTGC ACTCGGCATC
ATGGCGTTGC TGGGTAGCCG CGTGCCAGTG GCATTGAAGG TCTTCCTGCT GGCGCTCGCT
ATCATCGATG ACTTAGGCGT GATTGTGATT ATTGCGCTCT TCTACAGCAG CGATCTGTCA
ACCATTAGCT TAATTATTGC CAGCATTGCG ATTGTCGGTT TAGTGGCCTT AAACCGTAAA
GGCGTGACCG CATTAGCACC CTATGGCGTG TTGGGACTCG TCCTGTGGGT CGCGGTATTG
AAGTCAGGCG TCCACGCGAC TTTGGCAGGT GTGATTATTG CCTTCTGTAT TCCACTGCGG
GCAAAGGATG GCAGTTCACC CTCTGAGCAT TTAGAGCATA GCCTGCACCC TTGGAGCACT
TTCCTTATCC TGCCTGTTTT TGCCTTTGCG AATGCAGGGG TGGCCTTAGG TAACATGAGT
TTGGATGCCC TAATTTCCCC AGTACCCGTT GGGATTGCAT TGGGACTCAT GTTAGGTAAG
CCGATTGGTG TAATGTTGTT TAGTTATGTG GCCGTCAAAC TGAAGTTGGC GCAATTACCC
GATGGAATTG GTTGGAAGCA GATTGCGCCA GTGGCGGCAA TGTGTGGTAT TGGTTTTACT
ATGTCGATGT TTATTGCTTC GCTTGCATTT GAGCAAGCAG ACCCTATGTT CGGCGACTTA
GCACGCCTTG GCACCTTGAT AGGCTCAATT CTAGCGGCCT TGATCGGGTA TTTCTGGTTA
TCAAAAGTGT TACCTAAAAA AGGAGTATAA
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| Protein sequence | MEKAIRNFLS QESAGGILLL VAVVLAMLMA NSPLAGLYQG FLGTEVQVRV GALDLHKPLL
LWINDGLMAL FFLLIGLEVK RELLEGALSS VAQASLPTFA AIGGMLVPAG IYLLFNYGDP
VTQVGWAIPA ATDIAFALGI MALLGSRVPV ALKVFLLALA IIDDLGVIVI IALFYSSDLS
TISLIIASIA IVGLVALNRK GVTALAPYGV LGLVLWVAVL KSGVHATLAG VIIAFCIPLR
AKDGSSPSEH LEHSLHPWST FLILPVFAFA NAGVALGNMS LDALISPVPV GIALGLMLGK
PIGVMLFSYV AVKLKLAQLP DGIGWKQIAP VAAMCGIGFT MSMFIASLAF EQADPMFGDL
ARLGTLIGSI LAALIGYFWL SKVLPKKGV
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