Gene Shewana3_3006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3006 
Symbol 
ID4478549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3610178 
End bp3611686 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content52% 
IMG OID639727610 
Productleucyl aminopeptidase 
Protein accessionYP_870637 
Protein GI117921445 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0260] Leucyl aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.132109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTTA GCGTAAAGAG CGGTAGCCCC GAAAAACAAC GCTCAGCCTG CATCGTTGTC 
GGTGTTTATG AACCCCGCCG TCTATCCGGC ATCGCCGAGC AATTAGACAA GATTAGCGAA
GGTTATATCA GTAATCTACT GCGTCGCGGC GATTTAGAAG GTAAGCCTGG CCAAATGTTA
TTACTGCACC ACGTTCCTAA CGTATTGAGT GAACGAGTGC TGTTAGTCGG TTGCGGCAAA
GAACGAGAAC TAGACGAGCG CCAGTACAAG CAGATCATCA CTAAAACCAT CAACACCTTA
AATGAAACGG GTTCAATGGA GGCCGTGTGC TTCTTGACCG AGTTACACGT GAAAGGTCGT
GATACCTATT GGAAAGTTCG CCAAGCCGTC GAAACGACCA ATAGCAGTTT ATACAGCTTC
GATGCGCTCA AAACCCGTAA AGGTGAGACC CGTCGTCCAC TGCGCAAGTT AGTGTTTAAT
GTCCCGACTC GCCGCGAACT GACCTTAGGT GAGCGTGCGA TTGAGCACGG CATGGCCGTA
TCTGCCGGTA TGCATTTATG CCGCGATGTG GCTAACATGC CGCCAAATAT CTGTAATCCA
GCCTATTTAG CCTCTCAAGC TCGCCAATTG GCCGAAGTTC ACGAAAACCT GCATGTCACG
ACTGTGGGCG AAGAGCAAAT GGCGAAACTC GGCATGAACT CTTACCTTGC CGTTGGCCGC
GCCAGTGCCA ATGAATCCAT TATGACAGTG ATGGAATACA AGGGTGCCGT TGACAGCACA
GAGAAACCTA TCGTGTTGAT TGGTAAAGGC TTAACCTTCG ACTCAGGCGG TATTTCATTA
AAACCAGGCG AAGCCATGGA TGAAATGAAA TACGACATGG GCGGCGCTGC TGGTGTTATC
GGCACCATGA AAGCCATCTG TGATATGAAG CTGCCCATCA ACGTCGTCGG TATTCTCGCG
GGCTGTGAAA ACATGCCATC GGGCAATGCT TACCGCCCAG GTGACATTTT AACCACAATG
TCGGGTCAGA CCGTTGAAGT ACTCAACACC GACGCCGAAG GCCGTCTGGT ACTGTGTGAC
GTATTGACCT ATGTTGAGCG TTTCGACCCA GAGCTGGTTA TCGACACGGC AACACTGACG
GGCGCCTGTG TGATTGCCTT AGGCAAACAT GCCTCAGGCC TGTTCTCATC ACACAATCCT
CTGGCTCACG AGTTGCTGAA TGCAGGTGAG CAAAGTGGTG ACCGCGCATG GCGCATGCCA
CTGTGGGATG AGTACCAAGA TATGCTCGAT AGCCCATTTG CCGACATGAC CAACTTAGGT
GGTCGTCCAG CGGGCGCGAT TACCGCGGCT TGTTTCCTGT CTCGTTTCGC CAAAAAGTAC
AACTGGGCTC ACTTAGACGT GGCGGGTACT GCCTGGAACA GCGGCGCGAA TAAAGGTTCA
ACCGGTCGCC CTGTGCCAAT TTTGACTCAG TTCCTGATCA ATCGAGCTGG CGTAGAATTA
GGCGAGTAA
 
Protein sequence
MEFSVKSGSP EKQRSACIVV GVYEPRRLSG IAEQLDKISE GYISNLLRRG DLEGKPGQML 
LLHHVPNVLS ERVLLVGCGK ERELDERQYK QIITKTINTL NETGSMEAVC FLTELHVKGR
DTYWKVRQAV ETTNSSLYSF DALKTRKGET RRPLRKLVFN VPTRRELTLG ERAIEHGMAV
SAGMHLCRDV ANMPPNICNP AYLASQARQL AEVHENLHVT TVGEEQMAKL GMNSYLAVGR
ASANESIMTV MEYKGAVDST EKPIVLIGKG LTFDSGGISL KPGEAMDEMK YDMGGAAGVI
GTMKAICDMK LPINVVGILA GCENMPSGNA YRPGDILTTM SGQTVEVLNT DAEGRLVLCD
VLTYVERFDP ELVIDTATLT GACVIALGKH ASGLFSSHNP LAHELLNAGE QSGDRAWRMP
LWDEYQDMLD SPFADMTNLG GRPAGAITAA CFLSRFAKKY NWAHLDVAGT AWNSGANKGS
TGRPVPILTQ FLINRAGVEL GE