Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2988 |
Symbol | |
ID | 4478531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3593167 |
End bp | 3594468 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639727592 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_870619 |
Protein GI | 117921427 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGATTTG AATCTTTTAG TTTTTGCCCC GAGATTTTAC GCGCTATCTC AGATTGCGGT TATCAAAAAA TGACACCTAT TCAGCAGCAA GCGATCCCCG CTATCCGCCG CGGGCAAGAT GTGCTGGCTA GCGCGCAAAC AGGTACGGGC AAAACGGCGG CCTTCGCCCT GCCGATACTG CAAAAGATGG TAGAAAACCC TAGCGAGACC CTAAAATCGA ACGCGCGGGT ATTAATCCTC ACGCCGACTC GTGAGCTCGC AGCTCAAGTC GCCGACAACG TTGAAGCCTA CAGCAAGTAT TTAAATTTCA GTGTATTAAC CATTTACGGT GGTGTAAAGG TTGAGACTCA GGCGCAAAAG CTTAAGCGCG GTGCCGATAT TATTGTCGCG ACGCCGGGGC GCTTACTCGA ACACCTGACC GCCTGTAATT TAAGCCTCTC TAGCATCGAT TTTTTAGTGC TCGATGAAGC CGACCGTATG TTAGACATGG GCTTTAATGC GGATATTCAA AAAATCCTTC AAGCGGTGAA TAAGAAGCGT CAAAACCTAT TATTCTCAGC TACCTTCTCA AGTGCGGTGA AAAAACTGGC CAACGACATG ATGGTCAAAC CTCAGGTGAT CAGCGCCGAT AAGCAAAACA CCACCGCCGA TACCGTGAGC CAAGTGGTGT ATCCGGTGGA GCAGCGCCGT AAGCGCGAAC TCTTATCCGA ACTGATTGGT AAGAAGAACT GGCAACAAGT GTTGGTCTTT ACCGCGACGC GCGATGCGGC CGACACCTTA GTGAAAGAAT TGAATTTAGA TGGAATTCCC TCTGAAGTCG TCCACGGTGA AAAGGCACAA GGTAGCCGTC GCCGCGCGCT GCGTGAGTTT GTCTCAGGCA AAGTGCGCGT ATTAGTCGCC ACTGAAGTCG CCGCCCGCGG CTTAGACATT CCAAGCCTTG AGTATGTAGT CAACTTCGAC TTACCTTTCC TTGCCGAAGA CTATGTGCAC CGTATTGGTC GTACCGGTCG CGCGGGTAAG TCAGGGGTTG CGATTTCATT TGTGAGCCGT GAAGAAGAGC GCACACTCGC TGATATTGAA AAGCTAATCG GCCAAAAAAT TCGTCGTATT ACCGTGCCAG GATACGAAGT CGGTAGCCGC GACTTGCTGT TAAAGCAGCT ACAAACCCGT CGTAGTTTTG CCAAGAAACA ACAGCGACTC GACAACGTTA GCGAGCAGAT CATCGCCGAG AAAAGCATGC AGGGCCGCCG CGTGAAGATG AAGGTTGGCC AAGCCCCAAG TAAGGCGAAA AAACTTAAGT AA
|
Protein sequence | MRFESFSFCP EILRAISDCG YQKMTPIQQQ AIPAIRRGQD VLASAQTGTG KTAAFALPIL QKMVENPSET LKSNARVLIL TPTRELAAQV ADNVEAYSKY LNFSVLTIYG GVKVETQAQK LKRGADIIVA TPGRLLEHLT ACNLSLSSID FLVLDEADRM LDMGFNADIQ KILQAVNKKR QNLLFSATFS SAVKKLANDM MVKPQVISAD KQNTTADTVS QVVYPVEQRR KRELLSELIG KKNWQQVLVF TATRDAADTL VKELNLDGIP SEVVHGEKAQ GSRRRALREF VSGKVRVLVA TEVAARGLDI PSLEYVVNFD LPFLAEDYVH RIGRTGRAGK SGVAISFVSR EEERTLADIE KLIGQKIRRI TVPGYEVGSR DLLLKQLQTR RSFAKKQQRL DNVSEQIIAE KSMQGRRVKM KVGQAPSKAK KLK
|
| |