Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2985 |
Symbol | |
ID | 4478528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3587809 |
End bp | 3588600 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639727589 |
Product | ROK family protein |
Protein accession | YP_870616 |
Protein GI | 117921424 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.947193 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACAT TAACAATAGA CGTGGGCGGT AGCAAAGCCC TGTTCGAACT TCAACTCAAG GGGCATACAG AACAATATAA AATCCCCACG GGTGAAGGCT TTAAAATTGA AGATTTAAAT GATCAAATCG CGGCGCTGGA ACGGGATTAT GATTTACAGA ATTACCATTT AGCGATCGCT GTACCTGGAC TCGTACAACA GAATCGTTTG GTGTCCTGTA AATCTTTGCC CGGTCTCAAT GGGCTAAGCT TTGAAACCTT GAAAACCCAA GGCGAACTTA AGTTTATCTG CAATGATATC GACGCCGGTA TGCAGGCAAC CTGTGATGAA AAATATGCCT GTGAGTTGTT AGTCATGTGT GGCACTGGGA TTGGCATGTC GATCGCCTTG AGCGGCAAGG CTTTTACGGG GGCAACGGGA GTAGCCGGGG AGCTTGGGCA TTGCCGGGTG ATGACGGAGG CGGGGGAGTT TAGTCTTGAG CAGCTCGCCA GCGGCGATTC TATCCGCAGC CGTAAGATTG CTACTGCAGA TGATTTATAT CTCGCCGGTA CTTATCTGGG GATGGGGTTA GCGTGGGCGG TCAATCTGTT TAATCCTAAT CGGATCTGGT TAGCGGGCGG CATGATGAAT AGCGCGCCAT ACTACAAGGG TTGTCTCGAT AGTTTAAGAC GCATGGCCCT CAGTGCACCG TTAGCCGAAA TGAAGATTAA TCGTGTCGAT GATATGGAGA CCTTAGTCTG CCGTGGCTTA TCGGTGATCT TGGCAAGGGA TTACTCGAAG GACGCCGCCT AA
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Protein sequence | MQTLTIDVGG SKALFELQLK GHTEQYKIPT GEGFKIEDLN DQIAALERDY DLQNYHLAIA VPGLVQQNRL VSCKSLPGLN GLSFETLKTQ GELKFICNDI DAGMQATCDE KYACELLVMC GTGIGMSIAL SGKAFTGATG VAGELGHCRV MTEAGEFSLE QLASGDSIRS RKIATADDLY LAGTYLGMGL AWAVNLFNPN RIWLAGGMMN SAPYYKGCLD SLRRMALSAP LAEMKINRVD DMETLVCRGL SVILARDYSK DAA
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