Gene Shewana3_2975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2975 
Symbol 
ID4478518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3576515 
End bp3577429 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content48% 
IMG OID639727579 
Producthypothetical protein 
Protein accessionYP_870606 
Protein GI117921414 
COG category[S] Function unknown 
COG ID[COG2035] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATATT TGCTGACCTA TTTTAAGGGA ATGGCCATGG GGGCCGCCGA TGTGGTGCCT 
GGGGTTTCGG GTGGCACTAT CGCCTTTATC ACCGGTATTC TCGATACCCT GCTTGAAAGC
GTTAAACGTA TTAATCCGTC CCTTTGGGGC GTGATTAAGT CGCAGGGGAT TAAAGGTGCG
TTTGAACATA TCAATGGCGG ATTTTTACTG AGCCTATTAG CGGGCATCCT AACCAGTATT
TTTACCTTCG CTAAACTGAT TTCTTGGTTG CTGGTGGCCC ATCCCATTCC GATTTGGTCA
TTCTTCTTTG GCCTCATCAT CATCTCTGTG GTGCACATGC TTAAACAGGT GAGTGGTTTT
ACGCTGGCGC GTTTGGGATT ATTCGCCTTA GGGGTTTTGG CTGCTTGGGT GATCACTGTA
CTGAACCCTG TGTCGGTCGA GGCCAGCTAT TTAAATATTT TCTTCGGCGG TGCGATTGCC
ATTTGTGCCA TGGTATTACC GGGGATTTCG GGCAGTTTTA TCTTATTATT GCTCGGCTTA
TATCCAGTGG TACTCGCGGC GGCAAAAAAT ATCCAAATCG ATATTTTGGC CTGTTTTGCC
GTAGGCGCTT TGCTGGGGAT TTTAAGCTTT AGCCATTTAC TCTCGGCCTT GCTGCGTAAA
TACCATGATG CGACCGTAGT GTTTCTCACG GGCTTGATGC TCGGCACCTT AGGTAAAATT
TGGCCTTGGA AACAAACCTT AACGTGGCGT ACTAACTCCC ACGGTGAACA AGTGCCGCTA
TTGGAGCAAA ATATTTCGCC GCTAAATTTT GAACAAGTGA CGGGCCAACC TTCACAGCTG
ATGTTAGCTA TCGTGTGTAT GTTGGCGGCC ATTGCCTTAG TTTGGGGTTT AGAGAAGGTC
GGCAAACGGG ATTAA
 
Protein sequence
MKYLLTYFKG MAMGAADVVP GVSGGTIAFI TGILDTLLES VKRINPSLWG VIKSQGIKGA 
FEHINGGFLL SLLAGILTSI FTFAKLISWL LVAHPIPIWS FFFGLIIISV VHMLKQVSGF
TLARLGLFAL GVLAAWVITV LNPVSVEASY LNIFFGGAIA ICAMVLPGIS GSFILLLLGL
YPVVLAAAKN IQIDILACFA VGALLGILSF SHLLSALLRK YHDATVVFLT GLMLGTLGKI
WPWKQTLTWR TNSHGEQVPL LEQNISPLNF EQVTGQPSQL MLAIVCMLAA IALVWGLEKV
GKRD