| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2934 |
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| Symbol | |
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| ID | 4478938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3521680 |
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| End bp | 3523917 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639727539 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_870566 |
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| Protein GI | 117921374 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACTC AAGCCCAGAC TTACTTCTAT GACGGTAGCG ATGTTGCGCT GTTAAATGGT
CAATATACGG ATGTGTTTTC CCTGCTCGGT ATGCACAGCA TCAACGAGGG TAAGGCCTTG
GTGGTGCGCT GTTTTTTACG CAACGCCCAA AAAGTTGATG TGATAAGTCT TAAGGATGGC
CGTAAGGTAG CGAGCCTTGA GCGCGTTAAT GAGGCGGGGC TATTTGCAGG CACGCTTGGC
AGACGGGTTA AGCCTTTTTT GTATGCGCTA CGGGTGGTTT ATCCCCTCTG CGAGCTGGAT
ATTATCGATC CTTATCAGTT TGGTTCTCTC CTCGATAGTC AGGACTTATA CCTCTTTGGC
GAAGGAAGTT CTGAGCAGGC CTATCGCTTT TTAGGTGCGA ACTGGCGCCA CGTCGATAAC
GTCGAAGGCG TGCATTTTTG CGTATGGGCG CCCAATGCTA AGCGGGTTTC TGTGGTGGGG
GATTTTAACC ACTGGGACGA TACTCGCCAT GTGATGCGCC AACATATGGC CAACGGCTTA
TGGGAGATTT TTCTGCCAGA TGTTGCCCAA GGCGCGCACT ATAAGTTTGA TTTGGTTTAT
CAAAATGGCG AGCGCCACGC CAAATCCGAC CCTATGGCGA CCCAAATGGA ATGTGCACCG
CACAATGCCT CCATAGTGCC GAAAAAACAC CAACACCCGT GGGCGGATAC ACAATGGATG
CACAAACGGG CGACCACGGC TTGGCATCGC GCCGCTATGT CTATCTACGA AGTGCAGCTA
GGCTCTTGGC GCCGAAAAGG TGAGTTCGGT GAGCAATATT TTGATTATCA AGACTTAATC
GAGCAATTGA TCCCCTATGT GAAGGAGCAA GGTTTTACCC ATATAGAGTT GATGCCAGTC
AGCGAGTATC CCTTCGACGG CTCTTGGGGG TATCAACCCG TTGGCCTGTA TGCGCCGACC
CATCGTTTTG GCGATGCCAA TGGCTTAAAG GCCTTTATCG ATGCCTGCCA TCAGGCCGAG
ATTGGTGTGT TACTCGATTG GGTCGCGGCG CATTTCCCTA AGGATCCCCA TGGCCTTGTG
CGTTTCGATG GCACTTGCCT CTACGAACAT GAAGACCCGC GTAAAGGTAC GCACCCCGAT
TGGGACACGC TGATCTATAA CTACGACCGT GGTGAGGTAC GCAGCTTTCT GCTCAGCAAT
GCCTGCTATT GGCTGCGGGA ATTTCACCTC GATGGGCTCA GGCTTGATGC GGTGTCATCC
ATGTTGTACC TCGACTACAG CCGTGAACCC GGGCAATGGC TGCCCAATGC CTATGGCGGA
CGGGAGAATT TAGAGGCGAT TCATTTTCTG CAAATGTTGA ATCAACGTTT GTATCAAGCC
TTCCCTGGCA TTTGCATGAT AGCCGAAGAG TCGACCGCCT TTGCGGGGGT GACTAAGCCG
ACGGATTGCG GCGGGCTGGG GTTTGGTTTT AAGTGGAATA TGGGCTGGAT GAACGACAGC
CTAAGCTACT TGGGCCGCGA TCCCATCTAT CGCCAGTATC ACCATAACCA GCTGACCTTT
AGTTTGATGT ATGCCTATTC GGAGCAATTT ATGCTGTCGA TAAGCCACGA TGAAGTGGTG
CACGGCAAGG GCTCTTTGCT GCATAAAATC CCTGGCGATG ACTGGCAAAA ATTCGCCACC
CTCAGGGCCT ATTACGGCTT TATGTGGGGG CATCCGGGCA AAAAATTACT GTTTATGGGC
GGCGAGTTCG CCCAGCGCGA CGAATGGAAC CATAACCATA GCCTCGATTG GCATTTGCTC
GCTTTTGAAC CCCACCAAGG CGTACAGCGC TGGCTTCGGG ATCTGAATTG GCTTTATCGA
CAATTCCCCG CCTTATCCGT GCTCGACTAT GAGTCACAGG GGTTTCGCTG GCTTGATTGT
GACAATGGTC GCGACAGTAT TTTTAGCTTT GTTCGCTATG GCGAGGGTAG TGATGTGCCC
TTGGTGTTTG TGGTGAACAT GACGCCAACC CTGCACCAAG GATTTCGTAT CGGCTTGCCC
CAAGGCGGGG ATTTTTGTGA GTACCTCAAT AGCGACAGCC ATCTCTATGG CGGTAGCAAT
CAGGGGAATG CGGGCAAGGT GATTGCCGAA GATTTACCTT GGCAGGGCAT GGCATCGAGC
GCGTTGATCA CTGTGCCGCC CCTGGGTTGC TTAATCCTCG GGCCTGCGAC GGATGCGCCA
AGAGATACCA GCCTATGA
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| Protein sequence | MMTQAQTYFY DGSDVALLNG QYTDVFSLLG MHSINEGKAL VVRCFLRNAQ KVDVISLKDG
RKVASLERVN EAGLFAGTLG RRVKPFLYAL RVVYPLCELD IIDPYQFGSL LDSQDLYLFG
EGSSEQAYRF LGANWRHVDN VEGVHFCVWA PNAKRVSVVG DFNHWDDTRH VMRQHMANGL
WEIFLPDVAQ GAHYKFDLVY QNGERHAKSD PMATQMECAP HNASIVPKKH QHPWADTQWM
HKRATTAWHR AAMSIYEVQL GSWRRKGEFG EQYFDYQDLI EQLIPYVKEQ GFTHIELMPV
SEYPFDGSWG YQPVGLYAPT HRFGDANGLK AFIDACHQAE IGVLLDWVAA HFPKDPHGLV
RFDGTCLYEH EDPRKGTHPD WDTLIYNYDR GEVRSFLLSN ACYWLREFHL DGLRLDAVSS
MLYLDYSREP GQWLPNAYGG RENLEAIHFL QMLNQRLYQA FPGICMIAEE STAFAGVTKP
TDCGGLGFGF KWNMGWMNDS LSYLGRDPIY RQYHHNQLTF SLMYAYSEQF MLSISHDEVV
HGKGSLLHKI PGDDWQKFAT LRAYYGFMWG HPGKKLLFMG GEFAQRDEWN HNHSLDWHLL
AFEPHQGVQR WLRDLNWLYR QFPALSVLDY ESQGFRWLDC DNGRDSIFSF VRYGEGSDVP
LVFVVNMTPT LHQGFRIGLP QGGDFCEYLN SDSHLYGGSN QGNAGKVIAE DLPWQGMASS
ALITVPPLGC LILGPATDAP RDTSL
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