Gene Shewana3_2907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2907 
Symbol 
ID4479034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3479903 
End bp3481297 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content52% 
IMG OID639727513 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_870540 
Protein GI117921348 
COG category[C] Energy production and conversion 
COG ID[COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain 
TIGRFAM ID[TIGR00273] iron-sulfur cluster-binding protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.376851 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATATC AACATAATCA CGAGGCAACG GGTTCACAGG TTCACGCCCA CAAGGCCGAT 
ATTTTCTGCC GTGATGAAAC CCGTGTTGAC TGGCACTCAA AAGCCCTTTG GGTGCTGCGG
GAAAAACGTG ACCGCGCCGC AGGCAGCTTA CCCGAGTGGG AACAACTGCG TCAGTTAGGC
TCCGAAATCA AACTGCATAC CTTAACCAAC CTTGCACAAT ACCTTGAAAC CTTTGAGCAA
AACTGCCTTG CAAACGGTAT CAAAGTCCAC TGGGCAAAGG ATGGCGCTGA GCACAACCGT
ATCGTGCACG ACATTTTAGC TAGCCATAAA GTGAAGAAGT TAGTTAAGTC TAAATCCATG
CTCACAGAGG AATGTCACCT CAATCCTTAC TTAGAGCAAC GTGGAATTGA AGTCATCGAT
ACCGACTTGG GCGAGCGGAT TATTCAGCTG GCAAAAATGC CACCTTCGCA CATTGTGGTG
CCCGCCATCC ACATGAAAAA AGAAGAAGTG GGCGATCTGT TCCATGACAA ATTAGGCACT
AAGGCAGGCG AGTCCGATCC GCTATATTTG ACCCGCGCCG CTCGTGCTCA TCTGCGTGAG
CAATTCCTCA GCGCCGATGC CGCCATGACA GGGGTAAACA TGGCAATCGC CGATAAGGGC
GCCGTGGTCG TTTGTACCAA CGAAGGTAAC GCAGATATGG GCGCGAACCT GCCCAAGTTA
CAGTTGCATT CAATGGGTAT CGACAAAATT GTCCCCGATA TCGACAGCGC CGCCGTGTTA
CTGCGCACCC TAGCGCGTAA CGCAACGGGT CAACCCGTCA CCACCTATAG CGCCTTCTAC
CGTGGTCCAC AGGTCGATGG TGAGATGCAT GTGATCATCG TCGATAACGG CCGTACTGAA
ATGCTCAAGG ATAAAATCCT TGCCGAATCA TTGAAATGTA TTCGCTGCGG TGGCTGTTTA
AATACTTGCC CTGTGTATCG CCGCTCCGGT GGTTACAGTT ACAACTACAC CATTCCCGGC
CCTATTGGGA TTGCCGTAGG TGCCAAGCAT GATGACACTA ACTCCATCGC TTGGGCCTGT
ACCCTGTGTG GCAGCTGTAC CTATGTTTGC CCGACTAAGG TGCCGCTCGA TAAGATTATT
TTCCACCACA GACGCCTTAA GGCTGAAGCC GGACAACTCC CCTACGGCAA AAACGGTTAT
ATGCCACTAG TGGGTAAATT TATGGCAAGC ACGACCCTGC TCAATTGCTC AATGGGCGCG
GCTCGCACCG CACTGCGTAT TTTGCCCGGC AGTCTGCTCA AGCCCTTTAG CGGCGCTTGG
GGTAAATACC GTGAACTGCC CGTCGCCCCC AACTCCAGCT TCGAAGCTTG GTTTAAGAAA
CACAGGAGCC TATAA
 
Protein sequence
MAYQHNHEAT GSQVHAHKAD IFCRDETRVD WHSKALWVLR EKRDRAAGSL PEWEQLRQLG 
SEIKLHTLTN LAQYLETFEQ NCLANGIKVH WAKDGAEHNR IVHDILASHK VKKLVKSKSM
LTEECHLNPY LEQRGIEVID TDLGERIIQL AKMPPSHIVV PAIHMKKEEV GDLFHDKLGT
KAGESDPLYL TRAARAHLRE QFLSADAAMT GVNMAIADKG AVVVCTNEGN ADMGANLPKL
QLHSMGIDKI VPDIDSAAVL LRTLARNATG QPVTTYSAFY RGPQVDGEMH VIIVDNGRTE
MLKDKILAES LKCIRCGGCL NTCPVYRRSG GYSYNYTIPG PIGIAVGAKH DDTNSIAWAC
TLCGSCTYVC PTKVPLDKII FHHRRLKAEA GQLPYGKNGY MPLVGKFMAS TTLLNCSMGA
ARTALRILPG SLLKPFSGAW GKYRELPVAP NSSFEAWFKK HRSL