| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2884 |
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| Symbol | |
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| ID | 4478759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3451132 |
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| End bp | 3452688 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639727490 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_870517 |
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| Protein GI | 117921325 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000014858 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGGATT CCAACACGAC AGTTTCACAA CTGGCATTAC TCCAACAGAA ACTTCACTCT
GCCAAGTTGG CACTCGATGA AGTCAATGAA GATAGAAATG CTAAGTTACA AACCTTACTC
CAATTTATTG GCCATTTAAG TCTTGCCTGC AAAGGTCAGA ATTTAGAACT GGATAATAAA
CTCGCCAAAC TTCGCCATAA CTTAAATACC TTTGAGCGAG TCGATGAAGC GTTGCCGGAA
TTAGTCGATG TTGAACGCCT ATTAAAGGGT CAATACCACC ATGTGATGGT ACAACTTGAA
GAGAGCCGTA CTGGGCTTGC GCAAGTCATT CGCCAAATTC AACGGGTAAA CTCAGCGCCA
GATAAACTCA AAAAAGAAGT TAATTACTTT AAGCAGGATC TCGCCAAACC TTTCCATACG
GTGTGGGAAT ATATTCCTAA AGTAAAACAA ATCATTGGTT TCTATGACAC CATTTTGCAG
CAGCAATTTG AAGAAGCCGA AAAACTCGAT GTGTTACCGA AACACAGGCA GCTCGCCCAC
GAATTGGCGC AGATGATCTC GGAAATCGAG TTCCGTAAAG ATCAACGCGA CCAAGTACTG
GTCATTAAAG AGCTACTCGC TTCAGAAGTC GAAATCGATA CCCTGCTCGA AGCCTATCAA
ACCATTTTAT CCCTGCTGCT CGATAACATC GCCCGCGAAA AATCGGCCTC GCAAGAATTT
TTATACGCAC TAAACGATGC CTTAGCCGCG GTGCGTGAAG TGGTGAGTGA ATCCTACAAT
CACAATCAGC GCAGCTTCCA GCTGAAGACT CAGTTGAATC GGGAAATTAA TTCGCGCGTG
GATAACGTAG GTGAAGCCAT TATCGACACC GACGATATTG TCGATCTTAA AGCACAATTA
ACCGAACAGC TTAGCTCGAT TCGCTCCGCC CTCGCCCGTA AAGAAGCATT AGAACAGCGT
GAGCAGGCCC TGCTGCGCAA ATCAATGGAA ACCATGCGCA AAGAGCTGAA TGAGCTCAGT
AGCGAAGCGA ATACCTATAA AGAACGGTTG TTCGAGCAAC AAAAACTCAA TCTATTGGAT
AGCTTAACTC AACTGCCTAA CCGCGCCGCC CTCGAAGAGC GCATGGAGCT TGAGTATCGT
AATTACCAAC GCCACAGAAC ACCGCTGTGG ATTGCAGTAG CAGACATCGA CCATTTCAAG
AGCATCAACG ACAGCTTTGG TCACAGCACG GGCGATAAAA CCCTGCAGGT TATCGCCATG
GCATTAAAGA ACTCCCTACG GGATACCGAG TTTGTTGCTC GCTACGGCGG CGAAGAGTTT
GTGCTCATCC TGCCTGAAAT TGACGGCGGC GATATTGCTC AACTTTTAAA CAGAGTCCGT
GAAAAAGTAA AAAATATTCC ATTTAAATTT AAAAATCAGC GAATTACAGT TACAGTATCT
ATAGGGGCTG CGCAGGTTAT GGGGAACGAG CTCATACATG AAACCTTCGA GCGCGCCGAT
GCAGCACTCT ACAAAGCAAA ACATGAAAGC AGAGACAGGG TTGTGATTGA CGTATAA
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| Protein sequence | MKDSNTTVSQ LALLQQKLHS AKLALDEVNE DRNAKLQTLL QFIGHLSLAC KGQNLELDNK
LAKLRHNLNT FERVDEALPE LVDVERLLKG QYHHVMVQLE ESRTGLAQVI RQIQRVNSAP
DKLKKEVNYF KQDLAKPFHT VWEYIPKVKQ IIGFYDTILQ QQFEEAEKLD VLPKHRQLAH
ELAQMISEIE FRKDQRDQVL VIKELLASEV EIDTLLEAYQ TILSLLLDNI AREKSASQEF
LYALNDALAA VREVVSESYN HNQRSFQLKT QLNREINSRV DNVGEAIIDT DDIVDLKAQL
TEQLSSIRSA LARKEALEQR EQALLRKSME TMRKELNELS SEANTYKERL FEQQKLNLLD
SLTQLPNRAA LEERMELEYR NYQRHRTPLW IAVADIDHFK SINDSFGHST GDKTLQVIAM
ALKNSLRDTE FVARYGGEEF VLILPEIDGG DIAQLLNRVR EKVKNIPFKF KNQRITVTVS
IGAAQVMGNE LIHETFERAD AALYKAKHES RDRVVIDV
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