| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2821 |
|---|
| Symbol | purU |
|---|
| ID | 4479809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 3369927 |
|---|
| End bp | 3370829 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 639727427 |
|---|
| Product | formyltetrahydrofolate deformylase |
|---|
| Protein accession | YP_870454 |
|---|
| Protein GI | 117921262 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0788] Formyltetrahydrofolate hydrolase |
|---|
| TIGRFAM ID | [TIGR00655] formyltetrahydrofolate deformylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGACC ATAGAGGAGA TCAGATTTTG CAGTCACAGC ATGAAGTAGT ATCGAACGCG
CAACCCGCCT TAGCACGTAA AATCCTGATG ACAGATTGCG CCGATGCCCA AGGGCTTATC
GCCAAAATCA CCAGTGTTTG CTTCAATCAT CAGCTTAACA TCATTAAAAA CAGTGAGTTT
GTGGATAATG CTCAGGGGCG ATTTTTTATG CGTACTGAGC TCGAAGGGCA CTTTAATAGC
GAGCAATTAC TGCAGGATCT GCGGGAGGTG TTACCCGCGC AAAATCATAT GACCTTGGTC
AGCGCGGGCA AGAAGCGCAT CGTCGTGTTA GTCACCAAAG AGGCCCATTG TTTGGGCGAT
TTGCTGATGA AGGCCTACTA TGGCGGCTTG AATGTTGAGA TAGCAGCCGT GGTGGGCAAC
CATGATGTGT TAAGGGAATT GGTTGAAAAA TTTGATATTC CTTTTCACCT CGTGAGTCAC
GAAGGGCTCG ACAGAATTCA GCATGAGCAG GCGTTATTGG CCGCTGTGTC GCAATACGCG
CCCGATTATC TGGTGCTCGC CAAGTATATG CGAGTGCTGA CGCCGGATTT TGTCGCCGAA
TATCCAAACC GTATCATCAA TATCCATCAT TCGTTCTTAC CTGCCTTTAT CGGTGCCGCA
CCTTATCGCC AAGCTTGGGA GCGAGGAGTG AAAATCATCG GTGCGACGGC ACATTTTGTG
AATAATTGCC TCGATGAAGG GCCGATCATT AAGCAGGACG TGATCCCCGT CGATCACAGT
TACAGCGCGC TTGAAATGGC CAAAGCGGGG CGTGATGTCG AAAAAAGCGT CCTCAGTAAA
GCCTTACAGC TAGTGCTAAA TGAGCAAGTA GTGGTTTACG GCAATAAAAC CATAGTGTTT
TAA
|
|---|
| Protein sequence | MRDHRGDQIL QSQHEVVSNA QPALARKILM TDCADAQGLI AKITSVCFNH QLNIIKNSEF
VDNAQGRFFM RTELEGHFNS EQLLQDLREV LPAQNHMTLV SAGKKRIVVL VTKEAHCLGD
LLMKAYYGGL NVEIAAVVGN HDVLRELVEK FDIPFHLVSH EGLDRIQHEQ ALLAAVSQYA
PDYLVLAKYM RVLTPDFVAE YPNRIINIHH SFLPAFIGAA PYRQAWERGV KIIGATAHFV
NNCLDEGPII KQDVIPVDHS YSALEMAKAG RDVEKSVLSK ALQLVLNEQV VVYGNKTIVF
|
|---|
| |