| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2802 |
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| Symbol | lpxB |
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| ID | 4479789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3348381 |
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| End bp | 3349538 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639727408 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_870435 |
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| Protein GI | 117921243 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.433655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAA AATCTCAATT AGTGTTTGCA ATGGTCGCCG GAGAACTCTC CGGCGATATT
TTAGGTGCAG GTTTAATGGC CGCACTGCAA AAAACACACC CCAACGCTCG TTTTGTCGGT
ATTGGTGGAC CTCGAATGGA AGCCCTAGGC TTCGAATCTC TGTTCGCGAT GGAAGAGTTA
GCCGTGATGG GGATAGTCGA AGTGCTATCT CGTCTGCCAC GCTTACTCCA CGTGCGCTCA
TCCCTAATTA AGTCCATCAC CGAACTTAAG CCCGATTGTT TTATCGGTAT CGATGCACCG
GATTTTAATA TCGGTCTTGA GCTTAAGTTA AAGGCGCAGG GGATTAAAAC CGTTCACTAT
GTGAGCCCTT CGGTATGGGC ATGGCGCCCT AAGCGGATTT TTAAAATCGC TAAGGCCACC
AATATGGTGC TGTCGTTATT GCCCTTTGAG AAGGCCTTTT ACGATAAGCA TCAGGTACCT
TGTACCTTTG TTGGCCATAC CTTGGCTGAC GATATTCCGT TAGAGAGTGA TAAGGCGAGC
GCTCGTCAGT TGCTTGAACT CGATCCTGAG GCCGAATACC TCGCGATTTT ACCCGGCTCA
CGCGGTGGCG AATTAAAGCA ATTGGCCGAG CCTTTTGTGA AGGCTGCGCT ACTTATCAAG
CAGCAATTTC CCGATATTCG CTTTGTGACG CCCTTAGTGA ATCAAAAGCG CCGTGAGCAG
TTTGAGCAAG CATTAAAAGC GCATGCACCG GATCTGGAAA TCCACATGGT GGAAGGCAAA
TCCCGCGAAG TGATGGCCGC TGCCGATGGC ATTTTACTGG CGTCGGGCAC GGCAACGCTT
GAGGCCATGC TGATCAAACG CCCTATGGTG GTGGCGTATC GCGTGAGTCC GCTGACCTAT
CAGATCGCGA AAACCATGAT GCAAGTGAAC CGTTTCTCGC TGCCGAATCT GTTAGCGGGG
CGAGATGTGG TGCCAGAGCT TATCCAGCAC GATTGCACCC CAGAAAAGAT TGCCGAAGCG
GTTGGCGTTG AGCTGAATCG TGACTTTACG CCAATCAAAG CCGAGTTTGA GCGTTTACAC
CAAATGTTGC GCTGTGATGC CAGTCAAAAA GCGGCTGAGG CAGTGTTAGC GCTCGTCGAT
GCTAAGGATG TGAACTAA
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| Protein sequence | MSKKSQLVFA MVAGELSGDI LGAGLMAALQ KTHPNARFVG IGGPRMEALG FESLFAMEEL
AVMGIVEVLS RLPRLLHVRS SLIKSITELK PDCFIGIDAP DFNIGLELKL KAQGIKTVHY
VSPSVWAWRP KRIFKIAKAT NMVLSLLPFE KAFYDKHQVP CTFVGHTLAD DIPLESDKAS
ARQLLELDPE AEYLAILPGS RGGELKQLAE PFVKAALLIK QQFPDIRFVT PLVNQKRREQ
FEQALKAHAP DLEIHMVEGK SREVMAAADG ILLASGTATL EAMLIKRPMV VAYRVSPLTY
QIAKTMMQVN RFSLPNLLAG RDVVPELIQH DCTPEKIAEA VGVELNRDFT PIKAEFERLH
QMLRCDASQK AAEAVLALVD AKDVN
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