| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2800 |
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| Symbol | dnaE |
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| ID | 4479787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3344158 |
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| End bp | 3347634 |
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| Gene Length | 3477 bp |
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| Protein Length | 1158 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639727406 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_870433 |
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| Protein GI | 117921241 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.867982 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATC CTCGTTTTGT GCATCTTCGT GTCCACAGTG ACTTTTCTAT GTCCGATGGT
GTGGCTAAGG TCAAACCCAT CCTCGCCCAA GTTGAGGCGA AGGGCATGGC CGCGGTGGCA
TTAACAGATC AAAACAACCT CTGTGGTCTG GTCAAGTTTT ATGGTGGTTG CCATGGGGCG
GGGATCAAGC CGATTATCGG CGCAGACTTT TGGATGCAAG TGCCGGGGTT TGATGGCGAG
TTTTGTGCCT TAACCATTAT TGCGATGAAT AATGATGGCT ATCAAAACCT CACTCAAATC
ATCAGCCAAG CCTATTTACG TGGCCATGTT CAAGGGCGCG TGGTGATTGA CCAAGAGTGG
CTTGTGACCT ACAACGAAGG CATTTTGCTG CTGTCTGGTG GCCGAGAAGG GGACGTGGGT
AAGGCGCTGC TAAAGGGCAA CAATACACAA GTTGAGTCCT TATGCGAGTT TTATCAGCAG
CATTTTGAAG GGCGTTATTA CCTCGAGTTA TTGCGTACGG GACGCACCGA TGAGGAGCGT
TACCTGCATA TGGCGGTGGG ACTGGCGCAG GAAAAGGGCA TCCCTGTGGT GGCCACCAAT
CAGGTGGTGT TTTTAAAACC CGAAGACTTT GAATCCCACG AGATCCGTGT GGCGATTCAC
GATGGTTTTA CGCTTGCCGA TCCCCGCCGT CCTAAAAAAT ATAGCGAGCA ACAGTACCTT
CGCAGCGAAG AGGAAATGTG CGAGCTGTTT GCCGACATTC CGGCCGCGCT CGAAAATACC
GTTGAAATTG CCAAGCGCTG CAACGTTACC ATTCGCTTAT ACGAATACTT CTTACCGAAC
TTCCCCACCG GCGATATGTC GATTGAGGAT TATCTGGTTG ATTGCTCTAA GAAGGGGCTT
GAAGAGCGTT TAGAGTTCTT ATTCCCCGAT CCACAAGTGC GCGCTGAGCG CCGCGGTGAA
TATGACGAGC GTCTCGATGT CGAGCTTAAG GTTATCAACC AGATGGGCTT CCCCGGTTAC
TTCCTGATCG TAATGGAGTT TATCCAGTGG GGTAAGGATA ACGGCATTCC CGTGGGGCCA
GGCCGTGGTT CGGGCGCAGG CTCGCTTGTG GCCTATGCCC TTAAAATTAC CGACTTAGAC
CCCCTCGAAT TCGACCTGCT GTTCGAACGA TTCCTCAACC CAGAGCGGGT ATCTATGCCC
GACTTCGACG TCGACTTCTG TATGGATAGA CGCGATGAGG TAATTGACCA CGTGGCCGAA
CTCTACGGCC GTGAGGCGGT ATCGCAGATC ATTACCTTCG GTACCATGGC GGCCAAGGCG
GTTATCCGCG ACGTGGGTCG TGTGCTCGGC CATCCCTATG GCTTTGTGGA CCGTATTTCT
AAGTTGATTC CGCCAGAGCC TGGCATGACG CTCGCCAAGG CCTTTGAGGT GGAGCCTGCG
CTGCAGGAGT CCTACGATGC CGATGAGGAT GTGAAAGATC TTATCGACAT GTGCCGCAAA
CTCGAGGGTG TGACCCGTAA CGCTGGTAAG CACGCGGGGG GCGTGGTGAT TGCGCCCACC
AAGATCACCG ACTTCTCGCC GCTTTACTGC GATGCGGAAG GGAAAAACCC GGTAACCCAG
TTCGATAAGA ACGACGTGGA AACCGCTGGC TTAGTCAAAT TCGACTTCTT GGGATTAAGA
ACCCTCACCA TCGTCGACTG GGCGCTGGAG ATGATCAACA AGGTGGAGGT TAAAAACGGC
CGTCCACCAG TGCGGATTGA GGCGATTCCC CTAGACGATC CAGCTTCGTT CCGCTTGCTG
CAACGCTATG AAACCACTGC GGTATTCCAG CTCGAATCCC GTGGTATGAA GGATTTGATT
AAGCGTCTGC AACCCGACTG TTTCGAAGAT ATGATCGCAC TCGTGGCACT GTTCCGCCCG
GGGCCCCTGC AATCGGGCAT GGTGGATAAC TTTATCGAGC GTAAGCATGG TCGTGAAGAG
GTGTCTTATC CCGATTCTCA ATACCAGCAT GAATCCTTGA AGGAGCTGTT GTCGCCCACC
TACGGCATTA TTTTGTACCA AGAGCAGGTG ATGCAGATTG CGCAGGTGCT ATCGGGTTAT
ACCTTAGGTG GCGCTGACAT GCTGCGCCGT GCTATGGGTA AGAAAAAGCC TGAGGAGATG
GCCAAACAGC GCGGTACCTT TAAAGAAGGG GCGATTAAGA ACGGCGTCGA TGGCGAGTTG
GCGATGAAGA TCTTCGACTT AGTGGAAAAG TTTGCCGGCT ACGGCTTTAA CAAATCCCAC
TCCGCCGCGT ACGCGCTCGT GTCCTATCAA ACCCTGTGGC TCAAGACTCA CTTTCCCTCG
CAGTTTATGG CGGCGGTAAT GTCCGCCGAT ATGGATAACA CAGACAAAAT CGTCACCCTA
GTGGATGAAT GTGAGCGTAT GGGACTCACC ATTATTCCGC CGGATGTGAA CAAAGGTCTG
TTTAAGTTTA CCGTCGATGA TGATCTGCGT ATCGTCTATG GCATCGGCGC CATCAAAGGT
GTGGGTGAGG GGCCGGTTGA GTCGATTTTA GAGGCGCGTA AGGACGGCCC CTTTAAAGAC
TTATTCGACT TTTGTGCCCG TATCGATCTT AAAAAACTTA ACAAGCGGGT GATTGAAAAG
CTTATCTGCG CTGGCGCCTT AGATGCGCTT GGGCCGCACC GCGCCTCTAT GATGGCCACC
TTGCCTGAGG CGATAAGCGC CGCCGATCAG CACGCTAAGG CCGAGGCCAT CGGTCAGCAT
GATATGTTTG GTCTGCTCAA TAGTGACCCA GAGGACAGCA AGCAGCAGTT TGTCGAATGC
ACTCCGTGGC CCGATAAAAT TTGGCTCGAA GGGGAGCGCG AGACCTTAGG TCTATATTTA
ACCGGTCACC CGATTAATCA ATACCTTAAA GAGCTTAAGC ATTACACTTC CGGGCGCTTA
AAGGACGTGC ATCCAACCGA TCGCGGCAAA ACCGTTAAGG CGGCAGGCCT TGTGGTGGCT
ACCCGGGTAA TGCTCACTAA GCGTGGCTCA AAAATGGGTC TGCTGACCTT AGATGATAAG
AGTGCGCGCC TTGAGGTGAT GCTCTTTACC GAAGCTTTTG AGAAGTTTAA CCATCTGCTC
GAGAAGGACA GGATCCTGAT CTGCGAAGGT GAAGTAAGCT TCGATGATTT TGCCGGTGGC
AACCGCATGA CGGCGCGTAA TATTATCGAT ATCAGCGAGG CGCGTAGCCA CTTTGCCAGC
GCCTTAGAAA TCGATTTAGA CGCATCGCAG CTAACGCCTA GCGTGCTCGA AAGTATCGAG
CAGTCGATAA GTCCGTGGCG CAATGGCGCC GTGCCTGTAG TGATTAACTA CAGTCAAGCG
CAGGCTAAAG GCCAATTTAG GTTGGCGGAA AATTGGCGAG TCAACCCCAG TGATGAATTG
GTGTTTGCCC TTGAGAGCCT GCTTGGGCCT AATAAGGTGC GGATCCTGTT CCCCTAA
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| Protein sequence | MSDPRFVHLR VHSDFSMSDG VAKVKPILAQ VEAKGMAAVA LTDQNNLCGL VKFYGGCHGA
GIKPIIGADF WMQVPGFDGE FCALTIIAMN NDGYQNLTQI ISQAYLRGHV QGRVVIDQEW
LVTYNEGILL LSGGREGDVG KALLKGNNTQ VESLCEFYQQ HFEGRYYLEL LRTGRTDEER
YLHMAVGLAQ EKGIPVVATN QVVFLKPEDF ESHEIRVAIH DGFTLADPRR PKKYSEQQYL
RSEEEMCELF ADIPAALENT VEIAKRCNVT IRLYEYFLPN FPTGDMSIED YLVDCSKKGL
EERLEFLFPD PQVRAERRGE YDERLDVELK VINQMGFPGY FLIVMEFIQW GKDNGIPVGP
GRGSGAGSLV AYALKITDLD PLEFDLLFER FLNPERVSMP DFDVDFCMDR RDEVIDHVAE
LYGREAVSQI ITFGTMAAKA VIRDVGRVLG HPYGFVDRIS KLIPPEPGMT LAKAFEVEPA
LQESYDADED VKDLIDMCRK LEGVTRNAGK HAGGVVIAPT KITDFSPLYC DAEGKNPVTQ
FDKNDVETAG LVKFDFLGLR TLTIVDWALE MINKVEVKNG RPPVRIEAIP LDDPASFRLL
QRYETTAVFQ LESRGMKDLI KRLQPDCFED MIALVALFRP GPLQSGMVDN FIERKHGREE
VSYPDSQYQH ESLKELLSPT YGIILYQEQV MQIAQVLSGY TLGGADMLRR AMGKKKPEEM
AKQRGTFKEG AIKNGVDGEL AMKIFDLVEK FAGYGFNKSH SAAYALVSYQ TLWLKTHFPS
QFMAAVMSAD MDNTDKIVTL VDECERMGLT IIPPDVNKGL FKFTVDDDLR IVYGIGAIKG
VGEGPVESIL EARKDGPFKD LFDFCARIDL KKLNKRVIEK LICAGALDAL GPHRASMMAT
LPEAISAADQ HAKAEAIGQH DMFGLLNSDP EDSKQQFVEC TPWPDKIWLE GERETLGLYL
TGHPINQYLK ELKHYTSGRL KDVHPTDRGK TVKAAGLVVA TRVMLTKRGS KMGLLTLDDK
SARLEVMLFT EAFEKFNHLL EKDRILICEG EVSFDDFAGG NRMTARNIID ISEARSHFAS
ALEIDLDASQ LTPSVLESIE QSISPWRNGA VPVVINYSQA QAKGQFRLAE NWRVNPSDEL
VFALESLLGP NKVRILFP
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