| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2779 |
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| Symbol | |
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| ID | 4479766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3318131 |
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| End bp | 3319669 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639727385 |
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| Product | transcriptional regulator, TyrR |
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| Protein accession | YP_870412 |
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| Protein GI | 117921220 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00129727 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000313655 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCTTGG AAGTTAGCTG TCAAGATCGC GTGGGTTTAG CGAAAGACAT CTTAGTCGTG
TTAGAACGTT ATGGCATTAA TCTCATCGCT ATCGATGCCA GTAACCAGGG CTTTCTCTAC
CTGCAATTTG CCGAGGTCAG TTTTGATACC TTAAGTGCCT TGATGCCGCA GATCCGCAAA
GTGGAGAGTG TTCACGATGT GCGAACTGTG TCGTTTATGC CTTCGGAGCA GGAACACTAC
GCCTTAAAAA CCCTACTCAA AACCCTCCCT GACTCAGTGT TCTCCATCGA CGTGAAGGCG
CGCATTCGTA TCGTCAACGA GTCGGCGCTA CTCAATATGG GCATGGGAGA GCACGAAGTG
CTCGATGAGT CCTTAAACCA TTGGGTGCAA GGATTTAACT TCAGTCGCTG GCTCAGTGAG
AGCCAAGTGT TGCCACAGGC GGCGCGGGTC AATATCGGTC AAAACGAATA TCTGGCCGAA
ATGTTACCGA TTTACTTACC CGATGAGGAT GACAAGACCA TCCTCGTGGG CGCAGTCGTA
TCGCTTAAAT CGCCGGCGCG GGTCGGCAAG CAATTCAATG CACTGCAAAA TCAAACCGCG
GGCTTTGAAA ATGTGTTAGC CAGCAGCGAC AAGATGAAAG AAGTGCTGAA ACAAGCTCGC
CGGATGGCGC AGCTCGATGC GCCGCTATTA ATCACCGGCG AGACTGGTAC GGGCAAAGAG
CTTATGGCCA GAGCCAGCCA TGATGCCAGC ATGCGCCGCG AGAAACCTTT TATCGCTATT
AACTGTGCGG CACTGCCCGA TAGCGCCGCC GAAGAGGAAC TCTTTGGCTA CGTTAGCCAA
GGCAAAGTCA TTAAGCGCGG CTTTTTTGAA GAGGCAAAGG GCGGCACAGT GTTTCTCGAT
GAAGTAGCTG AAATGTCCAA GGCGGCGCAG GTTAAACTGC TACGGTTATT ACAGGATGGC
ACCTTTAGAC GCATTGGTGG CGACGAAGAA GTTCGCGCCG ATGTGCGGAT CATCTGCTCG
ACCCAGAAAA ACTTAGCCGA GCTGTGCCAA ACCGGTGAGT TTAGGGAAGA TTTGTATTAT
CGCATCCATG TTCTTAGCTA CCATATTCCG TCACTGCGCG AGCGCAAAGT CGATATCATT
CCGCTGACGG AGATGTTCCT CGAGCACTAC AGTCAGCAAC TCTCGAGCCC TGTGAGACGA
ATTTCGGCCC AATGTCGCGA TCATCTCTTA ACCTATGCTT GGCCGGGTAA CGTGCGTCAG
CTTAAGAATG CAGTCTTTAG GGCGGTATCT ATGTGGGACG GTTCGGGCGA GTTGACCGTT
GAGCAACTTA AGTTGCCATC CTACGCCGAA GGTTTTGGCT ATTTCGATAA TGCCTTCGAA
GGCAATCTCG ATGATGCGAT GAAGCAATTT GAGGCCAGCT TGCTGCGCCG CTTATATCCG
GCTTACCCCA GTACTCGCCA ATTGGCGAAA AAATTAGGGG TGTCCCACAC GGCCATCGCC
AACAAACTCA GGGAATACAA GATAGCCAAG CCAAAGTAA
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| Protein sequence | MRLEVSCQDR VGLAKDILVV LERYGINLIA IDASNQGFLY LQFAEVSFDT LSALMPQIRK
VESVHDVRTV SFMPSEQEHY ALKTLLKTLP DSVFSIDVKA RIRIVNESAL LNMGMGEHEV
LDESLNHWVQ GFNFSRWLSE SQVLPQAARV NIGQNEYLAE MLPIYLPDED DKTILVGAVV
SLKSPARVGK QFNALQNQTA GFENVLASSD KMKEVLKQAR RMAQLDAPLL ITGETGTGKE
LMARASHDAS MRREKPFIAI NCAALPDSAA EEELFGYVSQ GKVIKRGFFE EAKGGTVFLD
EVAEMSKAAQ VKLLRLLQDG TFRRIGGDEE VRADVRIICS TQKNLAELCQ TGEFREDLYY
RIHVLSYHIP SLRERKVDII PLTEMFLEHY SQQLSSPVRR ISAQCRDHLL TYAWPGNVRQ
LKNAVFRAVS MWDGSGELTV EQLKLPSYAE GFGYFDNAFE GNLDDAMKQF EASLLRRLYP
AYPSTRQLAK KLGVSHTAIA NKLREYKIAK PK
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