| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2750 |
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| Symbol | |
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| ID | 4478235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3281818 |
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| End bp | 3282831 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639727356 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_870383 |
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| Protein GI | 117921191 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTTAA CCAATAGGTT AACAGTGATG TCGGTTAAAA CGCGGCGACT TTCTCCTCAA
AGATGGGGCA AGATGTTGGC GAATCTTTTG GGCGCGGCAT TGTTGCTGCA ATTGACGGCT
TGCGGTGATG AATCCCCCCG CGTGCTGGGC ACAGTCGAGC GCGACAGGTT AACCCTCACC
GCACCCGTGG GGGAGCTGAT CAACCAGATT AATGTGGTCG AAGGCCAGCA AGTGCAGGCG
GGGGAGGTGT TACTCGAGCT AGATAGCACA GCCGCTAAGG CGCGCTTAGG TCAACGTCAA
GCCGAGCTTA AGCAAGCGCA GGCCAAGCTG GAAGAAGCCG TGACGGGGGC TCGCTCGGAA
GATATAGATA AAGCCCGCGC CGCCCTCGAC GGCGCCAATG CCAGCGTGAA AGAGGTGCAG
CAGAATTTTG AGCGCACGCA GCGGTTATTT AAGACTAAGG TGCTTAGCCA AGCGGACTTA
GATGCGGCGC TCGCGGCGCG TGATACCAGC CTTGCCAAGC AGGCCGAAGC CGAGCAGAGC
CTAAGACTGC TACAAAACGG TACCCGCAGC GAGCAACTCG AACAGGCCAG AGCCGCAGTC
GAGGCGGCCA TGGCTGGCGT GGCACAAGAG CAAAAAGCCC TCAAGGATTT AAGCCTAGTG
GCAGCAAGAT CCGCAGTAGT GGATACCTTA CCTTGGCGGG TGGGCGACAG GGTGGCCGCA
GGCAGTCAAC TTATTGGTTT ATTGGCAATT GAGCATCCCT ATGTGCGGGT GTATCTGCCT
GCGACTTGGC TCGATAGGGT CAAGGCGGGT AGCCAAGTGA AGATCCTTGT CGATGGCCGC
GCGCAGCCTA TTGCAGGCAC AGTGCGTAAT ATCCGCAGTC AACCGGCTTA CACTCCTTTT
TATGCCTTAA ATGAACGCGA TAGGGCGAGA TTAATGTATC TCACCGATAT TGATATTGCG
CCAGAGGGAG AGGATTTACC CACGGGAATG GCCCTTGAGG TACAACTGCC ATGA
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| Protein sequence | MILTNRLTVM SVKTRRLSPQ RWGKMLANLL GAALLLQLTA CGDESPRVLG TVERDRLTLT
APVGELINQI NVVEGQQVQA GEVLLELDST AAKARLGQRQ AELKQAQAKL EEAVTGARSE
DIDKARAALD GANASVKEVQ QNFERTQRLF KTKVLSQADL DAALAARDTS LAKQAEAEQS
LRLLQNGTRS EQLEQARAAV EAAMAGVAQE QKALKDLSLV AARSAVVDTL PWRVGDRVAA
GSQLIGLLAI EHPYVRVYLP ATWLDRVKAG SQVKILVDGR AQPIAGTVRN IRSQPAYTPF
YALNERDRAR LMYLTDIDIA PEGEDLPTGM ALEVQLP
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