Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2702 |
Symbol | |
ID | 4479106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3229149 |
End bp | 3229934 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639727308 |
Product | DeoR family transcriptional regulator |
Protein accession | YP_870335 |
Protein GI | 117921143 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTACTT TGAACACGAT AGAAAGGCAG CAGGAAATTG TGCGAATGAC ACAGTTACAG GGAAAGGTCT CTGTTGCCAA ACTCGCAGAA CACTTTGGGG TATCTGAAGT CACGATCCGC AGCGATTTAG CCATGTTGGA TCAGAAGCAG TTACTGGTGC GCTCCCGCGG CGGCGCTATG GTCAACAGTG AGTTGATCCG GGAGTTATCA CTCAAGGAGA AGGGCAGTTG CCATTCGGCC TTAAAGCAAG AGTTAGGTAA GGCGGCAGCG GCCTTGGTGC AAAACGGCGA TCGCTTATTG CTCGACTCGG GGACGACCAC CCAACAGGTG GCGGCGAACC TGATGGAGCA TAAGGATCTG ATCGTGATGA CCAACGGCCT GAATATCGCC ACCGAATTGG CTAAGGCCGA TGAAGTCGAG GTGATGTTAA CCGGCGGCCT GTTACGTAAA AAATCCCTGT CGTTCTACGG CAATATCGCC GAGAACAGCC TGCGGGATTA CAACTTTAAC AAGTTGATTT TAGGGGTAGA TGGTTTCGAT TTGCGGGTGG GATTAACCAC TCACTTTGAA AAAGAGGCCA GCCTCAACCG AATGATGTGT GAGATAGCGA GTGAAATTAT CGTTGTGACT GACTCATCAA AGTTTGATCA ACAAGCATTC CACGTTATTT GCAGCAGTCG CCGTATTACG CGCCTAGTGA CAGATACCGG GATCCCAGAG CGCTATGTTG ATGAATTAAC TAAACAAGGT GTGCAACTAC ACCTCATTGA GAAAGCTAAT TTATAA
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Protein sequence | MSTLNTIERQ QEIVRMTQLQ GKVSVAKLAE HFGVSEVTIR SDLAMLDQKQ LLVRSRGGAM VNSELIRELS LKEKGSCHSA LKQELGKAAA ALVQNGDRLL LDSGTTTQQV AANLMEHKDL IVMTNGLNIA TELAKADEVE VMLTGGLLRK KSLSFYGNIA ENSLRDYNFN KLILGVDGFD LRVGLTTHFE KEASLNRMMC EIASEIIVVT DSSKFDQQAF HVICSSRRIT RLVTDTGIPE RYVDELTKQG VQLHLIEKAN L
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