| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2696 |
|---|
| Symbol | |
|---|
| ID | 4478463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 3221705 |
|---|
| End bp | 3223063 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639727302 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_870329 |
|---|
| Protein GI | 117921137 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0738] Fucose permease |
|---|
| TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCA CGTCCGACAG TACCCAAGCC ACGGCCTCGC CGCAGGGCAG TTTTATTCCT
ATGTTATTGA TAGGGATTTT ATTTTTTGTG TTTGGCTTTG TGACTTGGCT CAATGGTGCC
TTGATCCCAT TTTTAAAAAT CGCCTGTCAG TTGAATGAGT TTGAAGCCTA TTTAGTCACC
TTTGTGTTTT ACATTGCTTA TTTTGTGATG GCGCTGCCAA CTTCATCCAT CCTCACGCGT
CTTGGCTATA AGATGGGCAT GACCTTAGGT TTAGGGATTA TGGCGGCTGG CGCGGGCTTG
TTTATTGTGG CGGCTTTGGT CGGCCATTTT GCGACCTTCC TCTTGGCGTT ATTTGTGTTG
GGCACAGGCT TAACCTTGCT GCAAACGGCG GCCAATCCTT ACATTGTCTG TATTGGCCCA
CGGGAAAGTG CGGCAATGCG GATAAGTTTA ATGGGGATAG TGAATAAGGG CGCGGGCTTT
ATTGTGCCAA TCATCTTCAC GGCCTGGATT TTAACGGGCA TGGAACCTTA CAGTGAAACG
GCATTGGCCA GCCTGTCCGA GGCGCAGCGC CAATTGGCGT TAACGGAATT AGCCAATCGT
TTAGTACACC CCTATTTAAT GATGATGCTT GTACTTTTGG GGTTGATGGC CTTTGTGTGG
TTTTCACCGC TGCCAGAGCC CGAATTAGGA GAGCGAGTCG AGCGTACTCA AACCGATTGG
AAGGCTATTC TACAATATCC GCAGGTGATC TTAGGGGCAC TGACACTCTT CTGTTATGTG
GGCGCCGAGG TGATTGCTGG TGATAGCATA GGACTATTCA GTCAGGGACT GGGGGTTGCG
CACTTTGGCA TGATGACCTC CTACACCATG GGATTTATGG TACTGGGCTA TGTGCTCGGA
ATCCTGCTGA TCCCAAGATG GATCAGCCAG CAAACAGCAT TAGTGGGCTC GGCTATCGCG
GGCTTGTTAT TTACCCTCGG GGTCTTGCTC AGCGACAGTC AAAGCCAAGC TTTGTCTGAG
CTGTTACTCG GTTGGTTAGG CGTGTTACCC GTGCCCGATC CCGTGCTTTA CTTAGCCCTA
CTTGGGTTAG CAAACGCCTT GGTATGGCCT GCGGTGTGGC CATTAGCCCT TGAAGGGCTC
GGGCGCTTAA CAGCCACCGC ATCGGCGTTA CTGATCATGG GAATTGCGGG CGGTGCGATT
CTGCCACTGC TCTATGGCTA CATCGCCCAT AGTCAAGGTG ACAGCCAAAT GGCGTACTTC
TTACTATTAC CTTGTTACGG CTTAATTTTT TACTACGCCA TTTGGGGCCA TAAGCTAACG
GCCAAAGTGG CCTCAAGCAT TGCGATGGTT AATGAATAG
|
|---|
| Protein sequence | MKFTSDSTQA TASPQGSFIP MLLIGILFFV FGFVTWLNGA LIPFLKIACQ LNEFEAYLVT
FVFYIAYFVM ALPTSSILTR LGYKMGMTLG LGIMAAGAGL FIVAALVGHF ATFLLALFVL
GTGLTLLQTA ANPYIVCIGP RESAAMRISL MGIVNKGAGF IVPIIFTAWI LTGMEPYSET
ALASLSEAQR QLALTELANR LVHPYLMMML VLLGLMAFVW FSPLPEPELG ERVERTQTDW
KAILQYPQVI LGALTLFCYV GAEVIAGDSI GLFSQGLGVA HFGMMTSYTM GFMVLGYVLG
ILLIPRWISQ QTALVGSAIA GLLFTLGVLL SDSQSQALSE LLLGWLGVLP VPDPVLYLAL
LGLANALVWP AVWPLALEGL GRLTATASAL LIMGIAGGAI LPLLYGYIAH SQGDSQMAYF
LLLPCYGLIF YYAIWGHKLT AKVASSIAMV NE
|
|---|
| |