Gene Shewana3_2666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2666 
Symbol 
ID4478433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3182819 
End bp3183538 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content48% 
IMG OID639727272 
ProductUDP-2,3-diacylglucosamine hydrolase 
Protein accessionYP_870299 
Protein GI117921107 
COG category[S] Function unknown 
COG ID[COG2908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01854] UDP-2,3-diacylglucosamine hydrolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000392649 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.131965 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGACCT TATTTATTGG CGATCTGCAC TTAAGTGCCG ATCGCCTCGA TATCACCCAA 
GCCTTTAATC GTTTCCTCGA TACAGAACTT GATGATGCCG ATGCCCTCTA TATTCTGGGG
GATTTATTTG AGGTATGGGT CGGCGACGAT TTAGCCGCGC CTTTTGCCCT CGAATTAGCG
CGCAAGCTCA ATCAAGTCTC CCAAAGATTG CCCATCTACT TTATTCACGG TAATCGTGAC
TTTATGTTAG GCAAACAATT TGCCGATGTT GCGGGCATGC AAATGTTGCC CGAAGTCACT
TGTTTAGATC TCTATGGTGT GAATACGGTT ATCTTGCACG GCGATAGCCT GTGCACCTTA
GATAAAGCCT ACCAACGCTT TCGCAAATTA CGCAGTTTTG CCTTCGCCCG TTGGCTGTAT
AGCTGTTTGC CGAAGAAAAA ACGTCAAGCC ATTGCCAATA AAATCCGCAG TAATAGCCAA
AGCAGCAATC AACAAAAAAG CTATGTCATC ATGGATGTGG AACCTAGTGC GGTGGATGCG
TTATTTGCCC AGAGCCACTG TAAACAGATG ATCCACGGTC ATACCCACAG ACCCGCCATC
CACGAGTTCA CTAACGGCTG TAAACGTATT GTGGTCGGTG ATTGGTACGA GCAAGGCAGT
GTGTTGGTGG TCAGCTCCGA CGGCGTAGAT TTAAAAAGCC TGCCCTTCGA CGCCAGCTAA
 
Protein sequence
MRTLFIGDLH LSADRLDITQ AFNRFLDTEL DDADALYILG DLFEVWVGDD LAAPFALELA 
RKLNQVSQRL PIYFIHGNRD FMLGKQFADV AGMQMLPEVT CLDLYGVNTV ILHGDSLCTL
DKAYQRFRKL RSFAFARWLY SCLPKKKRQA IANKIRSNSQ SSNQQKSYVI MDVEPSAVDA
LFAQSHCKQM IHGHTHRPAI HEFTNGCKRI VVGDWYEQGS VLVVSSDGVD LKSLPFDAS