| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2634 |
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| Symbol | |
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| ID | 4478397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3143097 |
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| End bp | 3143999 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639727237 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_870267 |
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| Protein GI | 117921075 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00803062 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCCCAT TGGTTCATCA CGCCAGCTAT TCCAAGCTGG CGTTACCCTC CCACCACCGC
TTTCCCACGA CCAAATACGC GCGTCTTTAC CAATATCTGC TCGATAATCA ACTGGCTGTA
CCGGCTCAAT TTCATACTCC CTCACCCATG ACGGCTGAAG ATGTAATGCA GGTGCATCAG
CAAGATTATG TCGAACAATT TATCCAAGGC AGATTAGCCT GTGCGGCCTT AAGACGCATC
GGCTTTCCAT GGAGTGAAGC CTTGGTTGAG CGCACCTTGC ACTCGGTATC GGGGACGAGT
TTGACCGCAA GCTTGGCGCT ACAAGCGGGT ATCGCCCTTC ACTTAACTGG CGGTTATCAC
CATGCTCATT ATGACTTTGG CAGTGGTTAC TGTATTTTCA ATGATTTAAT TATTGCCGCT
CGCAAACTGA TGGCCGAGCA ACAGCTACAT AAAGTGCTGA TTTTTGATTG TGATGTGCAC
CAAGGCGATG GCACCGCCAC CCTTAGCCAC AGGCATCAAG GCATTATCAG TTGCTCCATC
CACGGCAAAG AGAATTTCCC GAGCCGCAAA CAGCAGTCAC ACTATGATAT TGAATTGACT
AAGGGTTCGG ATGATAGTGC CTATCAGGAA ACCGTCGAGC AGACTCTCGA GCTGCTGATT
CGCCTCCATC AACCGGATCT CATCCTGTAT GACGCTGGCG TCGATATCCA CCAAGATGAC
GACTTAGGGC ACCTAATGAT CAGCAAGCAG GGATTGTATC AACGTGATTT AACCGTGTTA
TCTATGGCAA AAGCAGCAAA TATTCCTGTT GCAGCGGTAA TTGGCGGCGG CTACAGCCGA
GACGAACTAC AATTAAGCCA AAGACATAGC CAACTTTTTA TTGCAGCCAA CCATTTGTGG
TAG
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| Protein sequence | MIPLVHHASY SKLALPSHHR FPTTKYARLY QYLLDNQLAV PAQFHTPSPM TAEDVMQVHQ
QDYVEQFIQG RLACAALRRI GFPWSEALVE RTLHSVSGTS LTASLALQAG IALHLTGGYH
HAHYDFGSGY CIFNDLIIAA RKLMAEQQLH KVLIFDCDVH QGDGTATLSH RHQGIISCSI
HGKENFPSRK QQSHYDIELT KGSDDSAYQE TVEQTLELLI RLHQPDLILY DAGVDIHQDD
DLGHLMISKQ GLYQRDLTVL SMAKAANIPV AAVIGGGYSR DELQLSQRHS QLFIAANHLW
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