Gene Shewana3_2618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2618 
Symbol 
ID4478486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3123300 
End bp3123578 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content51% 
IMG OID639727221 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_870251 
Protein GI117921059 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000166621 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGTTCAGG CTACAGCAAG ACATTTGTTA GTGAGCAGCG AAGAGCAGTG CCAAGCACTT 
AAACAACAGA TCCTCGATGG TGCCGATTTT GCGCAAATCG CCCGCGCCCA TTCCTCATGC
CCATCGGGTG CACAGGGGGG TGAATTAGGT TCATTCGGCC CAGGCATGAT GGTGCGTGAA
TTTGATGAAG TAGTGTTTAG TGCGCCATTA AACGTGGTTC AAGGTCCAGT TAAAACCCAG
TTTGGATACC ACTTACTCGA AGTCACCAGC CGCGGTTAA
 
Protein sequence
MVQATARHLL VSSEEQCQAL KQQILDGADF AQIARAHSSC PSGAQGGELG SFGPGMMVRE 
FDEVVFSAPL NVVQGPVKTQ FGYHLLEVTS RG