| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2547 |
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| Symbol | |
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| ID | 4479209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3044528 |
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| End bp | 3045274 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639727150 |
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| Product | UMP phosphatase |
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| Protein accession | YP_870180 |
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| Protein GI | 117920988 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000020241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.838797 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATA TTATCTGCGA TATCGATGGT GTACTCCTGC ACGACAATAA GCTGATCCCC
GGCAGTGATA AATTTATCCA CCGCGTTCTC GACCAAGGCA ATCCCCTCGT TATTCTGACC
AATTACCCAG TACAAACGGG TAAAGATCTG CAAAACCGCC TCAGCGCCGC CGGGATAGAC
GTACCTGAAG AATGTTTTTA CACCTCGGCC ATGGCCACCG CCGATTTTTT AAAGCATCAA
GAAGGCAGTA AAGCCTTTGT GATTGGCGAA GGCGCCCTCA CCCATGAGCT CTACAAGGCT
GGCTTTACCA TTACCGACAT TAATCCCGAC TTCGTGATTG TGGGTGAAAC CCGCTCCTAT
AACTGGGATA TGATCCATAA GGCCGCCGGA TTCGTCGCCC GCGGTGCCCG TTTTATCGCC
ACCAATCCCG ACACTCACGG CCCCGCTTAC AGTCCAGCAT GCGGCGCCCT GTGTTCTCCA
ATAGAGCGCA TTACTGGCAA AAAGCCCTTT TATGTGGGCA AGCCCAGCTC GTGGATTATT
CGCTCGGCGC TCAACCATAT CGACGGTCAC TCCGAAAATA CCGTGATCAT TGGCGACAAT
ATGCGTACCG ATATTCTGGC GGGGTTTCAA GCGGGGCTTG AGACCATTCT GGTTACCAGC
GGCGTAAGTA AGCTTGAAGA TATCGATAAA GAGCCTTTCC GCCCCAATCA TGTATTCGCC
TGCGCCGGCG ATATTGATGT AGTTTAA
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| Protein sequence | MKNIICDIDG VLLHDNKLIP GSDKFIHRVL DQGNPLVILT NYPVQTGKDL QNRLSAAGID
VPEECFYTSA MATADFLKHQ EGSKAFVIGE GALTHELYKA GFTITDINPD FVIVGETRSY
NWDMIHKAAG FVARGARFIA TNPDTHGPAY SPACGALCSP IERITGKKPF YVGKPSSWII
RSALNHIDGH SENTVIIGDN MRTDILAGFQ AGLETILVTS GVSKLEDIDK EPFRPNHVFA
CAGDIDVV
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