Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2533 |
Symbol | |
ID | 4477589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3029895 |
End bp | 3030329 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639727136 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_870166 |
Protein GI | 117920974 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000432796 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.100758 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGTCG GTTATCAGCG TAAACGTCGT CGCCCCGTTG CCGAAATCAA CGTGGTGCCT TATATCGACG TCATGCTCGT GCTGCTGATT ATTTTCATGG TAACAGCGCC GATTGTGACC CAAGGGGTGA AAGTGGAGCT GCCTCAAGGG GCCGCCGAAG TGCTGCCTGC GGACAGTAAG CCGCCAGTGG TAGCGTCTAT CGATGCCGAC GGCGCTTATT TCCTCAATCA GGGCGGTTCC AATAACGAAG AGATGGAATT GGATGAGTTA GCCACCGCCG TTGCGGCAAT CATGGTGACA GAGCCTGAGC GCCCTGTGGT GGTGAAAGCC GATAGAAATA TTCCTTACGA TAACGTGATC CAATTGATGG TAACCCTGCA GCAGGCAGGC GTTCCCTCAG TCGGTTTGAT GACGGATTCA CCCAAGGAGA AATAG
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Protein sequence | MQVGYQRKRR RPVAEINVVP YIDVMLVLLI IFMVTAPIVT QGVKVELPQG AAEVLPADSK PPVVASIDAD GAYFLNQGGS NNEEMELDEL ATAVAAIMVT EPERPVVVKA DRNIPYDNVI QLMVTLQQAG VPSVGLMTDS PKEK
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