| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2500 |
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| Symbol | |
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| ID | 4477551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2990199 |
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| End bp | 2992472 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639727098 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_870135 |
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| Protein GI | 117920943 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0249349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00279942 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTAACA AAAAGTTTAA CAACAAGTCT TACACCCAAA AATCGACCAA GAGTTCCACC
TTCTCCTTAT CGTTAACGCG TGCGCCATTA GCGCTGGCCA TTTCGGCGGC GTTAAGCACG
GCCGCATGGG CGCAAACCGA TGCTATCGAT AAACCTGAGC CTAGCAATGA TATGGAAATC
ATGGTGGTGA CTGCAGATTT TCGCAGTGCC AGTTTAGAGA AAATGCCATC GAGCATTACC
GTTATCGATG CCCAGCAAAT TCAAGATGAA AGTGCCCAGC ACTTTGAAGA CGTGATGAGT
TCTATCGCCA ACTTTAACTG GTCGGGTGGC AGCTCACGTC CTAAGTATTT CCAGATCCGC
GGCGTAGGTG AGCAGGAACA ATATCAAGGC GCGCCTAACT CATCTGTAGG TTATATCATT
GATGATATTG ATTTATCTGG TATCGGCATG GTGTCGAGCA TGTACGATCT GCAGCAGGTC
GAAGTGTTAC GCGGCCCGCA GGGCACCCGC TATGGCGCCA ATGCGTTAGC GGGCTTGATT
TACCTAAAGA GCAACGACCC GACCGATGTG TTTGAACATG GCGCCGAGGT CTCTTTAGGC
AATGACGATT TGCAAACCTT CAGCGGTTTT AGCTCTGGGC CGTTAACCGA TTCGGGCAAA
TTGTTATACC GCGTGTCGCT GCAGCAACAT CAACAAAATG GTTATCGCGA TAATCTCTAT
TTAAATAAAG AAGATACCAA TGGTCGTGAT GAATTTACTG GTCGCGCTAA ATTACGCTGG
TATGCCAGCG ATAATCTGCA ACTTGATTTA ACTCTGCTGC ATGCCGATTT TGATAACGGC
TACGATGCCT GGAGCTTAAC CAACGATCCT AAACATACTA TTTCGGATCA GCCGGGTGTC
GATAGCCAGC GCACCACGGG CGCTGGATTT AAAGCAACCT ACTCGGGCGC AGAGTCTTTC
GAGCTTACCT CGCTGACCTC ATTTGCCAAT ACCGATCATC ATTATAGTTA CGATGGCGAT
TGGGCAAACC CTGAATATTG GGCATCCAAG CAATGTGATA TTTATGATGC GGATTGGAAT
TCAATTGGAA AGTTACCTTG TGTTTATGAT GCAACATGGT CAAAAGTGGG TCAGAGAAAA
ACGTTTACAC AAGAATTACG TCTTACTTCA AGTGATGCTG GAAGAATATT TAACGAGTCT
ACAGATTGGT TAATTGGAGT TTACTTTTCG AGTTTGCAGG AAGACAACAG TCTGATCGAC
TATGCCAAAT ATAGTAATGG TGGTTTGAAT CCCAGTTTTA AAGAAAGAAC TAAATATTTA
GACTCAACAT ATGATGCGCA AAATTACGCA ATATTTGGTC AACTCGATAT TGATATGAGT
AATGATTATT TATTGTCACT TGGACTGAGG TTAGAGAATC GCTCGAGTGA TTATAGCGAT
ACAAATCTGG ATGATTTTTC TCCATCAGAA ACAATGTGGG GTGGTCATCT TGCTTTAAGT
AAAGCACTTA GTGAACAGCA TAATGCTTAC ATTCGAGTTG CTAGAGGATA TAAAGCGGGT
GGTTTTAATA TGACGCTTCC TGCTGATTTC AGCGATAAAA AGGAGTTTAA TACTGAAACT
TTATATAACT ATGAATTAGG TCTTAAATCC TCATGGTTAT CAGGAGCGTT AAGTACAAAT
GTTGCTCTTT TTTATATGGA TAGACAAGAC CAACAAGTAT CTGCATCTCA ACAAAATCCT
GAAGATTTAA GTGAGTTTAT TCTTTTTATC GATAATGCCG GAAGTTCAAA AAACTATGGC
TTAGAGATTG ATGCTAATTG GTATATCGAC AGTAATTGGC ATTTATATTC TAGCGTTGGT
TACTTAAATA CAGCCTATGG TGATTATCAA TACGAAGTAG CTGAAGACCA GTTTGTGGAT
TTAACGGGTC GCGATTTGGC CCATTCACCA CACTTAACCT ACAGCTTAGG CGGTACGTAT
CGTGCGAACT CGGGTTGGTT TGCCAACGTC AACATGAGTG GTAAGAGTGA GTTTTACTAC
TCAGACAGCA ACGACTCGCG CTCTGAGCCA TACACCATTG TGAATGCGCG CTTAGGTTAC
GAGGCGAGTG CTTGGTCGGC GTATTTATGG GGCCGCAACC TGTTCGATGA AGAATATGGC
GTGCGTGGTT TCTATTTTGG TAATGAGCCG GATAACGGCT GGGCGGAAAA GCAATATATC
CGCTACGGCG ACCCACGCCA AATCGGGGTG ACACTAAACG TTAAGTTTAT GTAA
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| Protein sequence | MSNKKFNNKS YTQKSTKSST FSLSLTRAPL ALAISAALST AAWAQTDAID KPEPSNDMEI
MVVTADFRSA SLEKMPSSIT VIDAQQIQDE SAQHFEDVMS SIANFNWSGG SSRPKYFQIR
GVGEQEQYQG APNSSVGYII DDIDLSGIGM VSSMYDLQQV EVLRGPQGTR YGANALAGLI
YLKSNDPTDV FEHGAEVSLG NDDLQTFSGF SSGPLTDSGK LLYRVSLQQH QQNGYRDNLY
LNKEDTNGRD EFTGRAKLRW YASDNLQLDL TLLHADFDNG YDAWSLTNDP KHTISDQPGV
DSQRTTGAGF KATYSGAESF ELTSLTSFAN TDHHYSYDGD WANPEYWASK QCDIYDADWN
SIGKLPCVYD ATWSKVGQRK TFTQELRLTS SDAGRIFNES TDWLIGVYFS SLQEDNSLID
YAKYSNGGLN PSFKERTKYL DSTYDAQNYA IFGQLDIDMS NDYLLSLGLR LENRSSDYSD
TNLDDFSPSE TMWGGHLALS KALSEQHNAY IRVARGYKAG GFNMTLPADF SDKKEFNTET
LYNYELGLKS SWLSGALSTN VALFYMDRQD QQVSASQQNP EDLSEFILFI DNAGSSKNYG
LEIDANWYID SNWHLYSSVG YLNTAYGDYQ YEVAEDQFVD LTGRDLAHSP HLTYSLGGTY
RANSGWFANV NMSGKSEFYY SDSNDSRSEP YTIVNARLGY EASAWSAYLW GRNLFDEEYG
VRGFYFGNEP DNGWAEKQYI RYGDPRQIGV TLNVKFM
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