| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2492 |
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| Symbol | |
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| ID | 4476673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2982552 |
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| End bp | 2984780 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639727090 |
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| Product | peptidyl-dipeptidase Dcp |
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| Protein accession | YP_870127 |
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| Protein GI | 117920935 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000562002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0797641 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGGAC TTAGCCTAAA ATCACAGGCC CTTAACGCGC GCACACTCAA ACCACACGCG
ATTAAACTGA CCTTTAGCGC CATCACGCTC GCCCTCGCCT TAAGTGGCTG TAGTGCACAG
CACAGCGATG CTGCGGCGCA GGCGACAGTC GCACCGAATG CGATGTCGGC GCAAATCATC
AGCCAAAATA CCAGCAACCC ATTCTTTAAA CCCTATGATA CATTTATGGA AATTCCGGCC
TTCGACAAGA TTAAGCCAGA GCATTTCCTC CCTGCATTTA AGGCGGGTAT CGCCCAGCAA
CACGAAGAAA TTCAAGCGAT TGTCGATAGC AAAGACAAGC CTACCTTTGC CAATACCATC
GAAGCGATGG AGTTTTCGGG CGATCTCGTC ACCCGCGTAT CCAACGTTTT CTTTAACTTA
ACTGGCGCTG ATACTACTCC TGAGCTGCAA GCGATTTCTA AGGAAGTCTC GCCGATGTTA
TCGTCTGCCG AAGACGATAT CTTATTGAAC GATAAACTGT TTCAACGTGT TAAAGCCGTT
TACGACAGCA AAGGCAGCCT AAAGCTCAAC ACGGCGCAGG CCAAATTACT CGAAGACACC
TACAAGTCGT TCACCCGTGG CGGTGCTAAC CTCAGCGAGC AGGATAAAAC CAAGCTGCGC
GCCCTGAATG AAGAAATCGG CAAGCTTAAC TTAGCCTTTG GTGACAATCT GTTAGCCGAA
ACCAATGCCT TCGAGCTGGT GATTGATAAG CAAGCTGACC TGTCTGGTTT ACCCGCCGAT
GTGATTGCAA CTGCCGCCGA AACCGCGAAA AAGCGTGGCC ATGAAGGCAA ATGGGTATTT
ACCACCTCAC GCCCATCTAT CACGCCGTTT TTAACCTATG CCGATAATCG CGAGTTACGC
GAAAAGCTCT ATAAGGGGTA TATCGAACGC GGTAACAATA ATAATGCCAA TGATAACAAA
GTCATTCTAG CAAAAATTGC CGCGCTGCGT GCCGAACGTG CACAGCTCAT GGGCTATAAA
ACCCATGCGG ATTTCGTGTT AGAAGAGCGC ACCGCCAAGA CGCCTGAAAA TGTCTATGGC
TTACTCAATA AAGTTTGGCC AGCAGCCCTT GCCCAAGCCA AGGCTGAAGT TGCGGATATG
CAGGCGTTAA TCGACAGCCA AGGCGGCAAG TTTAAGCTGC AAGCTTGGGA TTGGGATTAC
TATGCCGATA AAATCCGTGT CGCGAAGTAC AGCTTTAACG AGCAGCAAAC TCGCCCTTAC
TTCTCCCTCG ACAGCACCCT AAAAGGCGTG TTCTATACGG CCAATCGCCT CTATGGCTTA
ACCTTTAAAG AACGTACCGA CTTACCCAAA TACAACCCAG AAGTACGTAC TTGGGAAGTG
TACGATAAAG ACGGCAAGCT CATGGCCATC TTTATGGGCG ACTATTTTAC CCGTGATAGC
AAACGCGGCG GCGCTTGGAT GAACTCGTTC CGCAAGCAAT ACCATATGAA CGGTGTCGAT
TCAAAACCCA TTATTGTCAA CGTGTTGAAC TACCCTCGTC CTGCGGGTAA TGAGCCTGCG
TTGCTCACCT TCGATGAAGC CAGCACCCTG TTCCATGAGT TTGGCCATGC GCTGCACGGC
ATGTTATCCA ATGTCGAATA TCGCTCTCAA GGCGGAACGG CAGTACCTCG CGACTATGTA
GAGTTCCCTT CACAGGTCAA CGAAAACTGG ATGACTCAGC CTGAAGTGCT CGCGCAATTT
GCGAAGCACT ACAAAACTGG TGAAGTGATC CCGCAGGAAC TGGTGAAAAA AATCCAAGCC
GCCAGCAAAT TCAACCAAGG CTTTGCGACC GTTGAATATA TGGCCGCCAC TAAGCTCGAT
TTAGATTGGC ACACCCTAAC CGATACCACG CCTAAGGATG CCGCCAAGTT TGAGGCCGAC
TCCTTAGCCG CCATGGGATT GATTAATGAG ATCAGCCCAC GTTACCGCAG CACTTACTTC
TCGCATATCT TCGCGGGCGG TTATTCAGCC GGTTACTACA GCTACCTCTG GTCAGATATT
TTAGGTGCCG ATGCCTTTGA AGCCTTTAAA GAAAATGGCA TTTTCGATAA AGCGACGGCC
GATGCCTTCC GTAACAACAT CTTATCTAAA GGTGGCAGTG ACGACCCTAT GCTGATGTAT
AAAAACTTCC GTGGTAAAGA AGCTGGCATT GAGCCGCTGC TGCGTAGCCG TGGTCTGTTA
GCGGAGTAA
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| Protein sequence | MKGLSLKSQA LNARTLKPHA IKLTFSAITL ALALSGCSAQ HSDAAAQATV APNAMSAQII
SQNTSNPFFK PYDTFMEIPA FDKIKPEHFL PAFKAGIAQQ HEEIQAIVDS KDKPTFANTI
EAMEFSGDLV TRVSNVFFNL TGADTTPELQ AISKEVSPML SSAEDDILLN DKLFQRVKAV
YDSKGSLKLN TAQAKLLEDT YKSFTRGGAN LSEQDKTKLR ALNEEIGKLN LAFGDNLLAE
TNAFELVIDK QADLSGLPAD VIATAAETAK KRGHEGKWVF TTSRPSITPF LTYADNRELR
EKLYKGYIER GNNNNANDNK VILAKIAALR AERAQLMGYK THADFVLEER TAKTPENVYG
LLNKVWPAAL AQAKAEVADM QALIDSQGGK FKLQAWDWDY YADKIRVAKY SFNEQQTRPY
FSLDSTLKGV FYTANRLYGL TFKERTDLPK YNPEVRTWEV YDKDGKLMAI FMGDYFTRDS
KRGGAWMNSF RKQYHMNGVD SKPIIVNVLN YPRPAGNEPA LLTFDEASTL FHEFGHALHG
MLSNVEYRSQ GGTAVPRDYV EFPSQVNENW MTQPEVLAQF AKHYKTGEVI PQELVKKIQA
ASKFNQGFAT VEYMAATKLD LDWHTLTDTT PKDAAKFEAD SLAAMGLINE ISPRYRSTYF
SHIFAGGYSA GYYSYLWSDI LGADAFEAFK ENGIFDKATA DAFRNNILSK GGSDDPMLMY
KNFRGKEAGI EPLLRSRGLL AE
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