| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2483 |
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| Symbol | |
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| ID | 4476664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2969437 |
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| End bp | 2970840 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639727081 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_870118 |
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| Protein GI | 117920926 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGACAC TTTTTTCGCC TTTATTGCCA GCAAGACAAA GCCATATCGC ACTGCTGTGC
GCAGGCATTA TCTACTGGCT AACCGGCGCC TTAGGCCAAA CATTATTTAG CTTACAACCT
GAGAATATCA CCTTGATTTG GCTGCCCTCC GGTATTGCCT TGGTGATGTT ACTTATGTGG
GGGCGTAAGG CATTGCTGCT GATATTCCTC GTCAGTTTTA CCTTGAATTT TCAAGGCATG
TTGCAACAGG ATTCCCTCGG TCTTTCGCTG CTGCATACTT CGATTGCCGC GTTAAGCGAT
ATGCTCGCGC CTGCGATGTC GATGTTGTTA CTCAGACGCT TCTTGCCACA GGGTACGGGA
AGTGCGAATG ACTTGATGAA GTTTGTGGTG GTCGCAGGCA TCATCCCCAT TTTCGGTTCC
AGCGCATTGT TATCCGCTAA TTTAGTGCTT GGCGGTTATA TTTTACCCAG CGCGTTTTGG
AGTATGGGGC AAATGTTTTT CTTTGCCGAT ATTCTGGGAA TAGTATTGGT GTATCAGCTG
TATGCAGGAT GGGTGGAACC CAATGCGCTA AGCATAGCCA AAACCCGCCA TATCCTTTTG
CCCTTGATTG GCTTGCCACT GTTTTGTTTG GTGGGGGTTA AGTTCGATCT GGGCTGGTTA
TTTTATGTGA TCCCGCCGCT GTTGGTTGTG CTCTCCTTTG AGGTCACGCG TTTTTACCTC
GCGCTGTTTA GCAGCGCCTC CATGCTGTTT ATGATTTTAG CGACAGCTCA GGGTTATGGT
CCGTTTATCA ATGCCACGCC ATATCAAACC AATGCGGAGA TGATGGCTTT TGTGTTGTCA
TCGGCATTAA CGATTTTTGG GGTGTCGTTA CAGCGGGCAC AGCTGCGCCG AACCGAGAGA
GATAAGCAAA CTGCGGTGCA AGAGGCGCTC TATGATCCCT TGTCGGGGCT ACTGAATCGC
CGCGGCTTTA TGCCACAGCT GACAAATCTT AACGGCCAGA CAGTGCGTTA TTCGGTCGCT
ATGTTGGATC TCGATAACTT TAAGATGATT AACGACACCT ATGGTGACAG TGTGGGCGAT
AGGGTTATTC AGCTGTTGGC GCAGTTGATA CACAATCATA GCCGTAGCCA AGATATTGCC
GCGCGCCTAG GCGGTGAAGA GTTCGCCCTT GTGCTTAGGG ATATTGATGC TGAGCAGGTG
TATCCGGTGC TTGAGCGTAT TCGAAAATCC TTTGCTGAGA TGTCGATAGC GGCCGAGGAG
CACACGATTT ACTGCACTGT GAGCATTGGT TGGGTGGAGT ATCAGCAAGG TATCGCTGGC
GAGTCGTTGC TGCATTTGGC GGATAAGGCT TTGTATCAAG CCAAGGCAAA GGGCAAAAAC
ACGATTGTAA AGTATCAAGC TTGA
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| Protein sequence | MKTLFSPLLP ARQSHIALLC AGIIYWLTGA LGQTLFSLQP ENITLIWLPS GIALVMLLMW
GRKALLLIFL VSFTLNFQGM LQQDSLGLSL LHTSIAALSD MLAPAMSMLL LRRFLPQGTG
SANDLMKFVV VAGIIPIFGS SALLSANLVL GGYILPSAFW SMGQMFFFAD ILGIVLVYQL
YAGWVEPNAL SIAKTRHILL PLIGLPLFCL VGVKFDLGWL FYVIPPLLVV LSFEVTRFYL
ALFSSASMLF MILATAQGYG PFINATPYQT NAEMMAFVLS SALTIFGVSL QRAQLRRTER
DKQTAVQEAL YDPLSGLLNR RGFMPQLTNL NGQTVRYSVA MLDLDNFKMI NDTYGDSVGD
RVIQLLAQLI HNHSRSQDIA ARLGGEEFAL VLRDIDAEQV YPVLERIRKS FAEMSIAAEE
HTIYCTVSIG WVEYQQGIAG ESLLHLADKA LYQAKAKGKN TIVKYQA
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