Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2482 |
Symbol | |
ID | 4476663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2968200 |
End bp | 2969240 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639727080 |
Product | 4-hydroxyphenylpyruvate dioxygenase |
Protein accession | YP_870117 |
Protein GI | 117920925 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.491065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.799706 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGCG AACTCAATCC ACTGGGCTTA CTCGGTATCG AATTTACCGA ATTTGCCAGC CCCGACAGCG ATTTTATGCA CAAAGTGTTT ATCGACTTTG GTTTTTCACT GCTGAAAAAA GCCAAAAATA AAGACATTTT ATACTACAAA CAAAATGACA TTAACTTCCT GCTTAACAAC GAGCGCGAAG GGTTTTCGGC AGAATTTGCC AAATCCCACG GCCCTGCCAT TAGCTCTATG GGCTGGCGCG TAGAAGATGC CAGCTTTGCT CACCGTGTGG CGGTAGAGCG CGGCGCCAAA GCTGTGGCCG ATTCGGCCAA GGATCTGCCT TATCCAGCCA TTTATGGTAT TGGTGACAGC TTAATTTATT TTATCGACAC CTTCGGTGCC GACAACAATA TCTATGCAAC TGACTTTGAA GACTTAAGTG AGCCAGTGAT CACCCAAGAG AAAGGCTTTG TCGAAGTAGA CCATTTAACC AATAACGTCT ACAAAGGCAC CATGGAACAT TGGGCGAACT TCTACAAAAA CATCTTTGGT TTTACCGAAG TGCGCTACTT CGACATCAGC GGCGTACAAA CCGCACTGGT GTCTTACGCC CTGCGCTCAC CTGATGGCAG CTTCTGTATC CCAATTAACG AAGGTAAAGG CAACGATAAG AACCAAATCG ATGAATACCT GAAGGAATAC AATGGTCCAG GTGTACAACA CTTAGCCTTT AGAAGCCGTG ATATCGTTAA ATCCTTAGAT GCGATGGAAG GTAGCTCGAT TCAATGCTTG GATATTATTC CTGAATATTA CGACACCATT TTCGATAAAG TCCCACAAGT GACCGAAAAC CGTGAGCGTA TCAAGCATCA CCAAATTTTG GTGGATGGCG ACGAGTCAGG CTATTTATTG CAGATCTTCA CTAAAAACCT GTTTGGCCCG ATTTTTATCG AAATCATTCA ACGTAAGAAC AACTTAGGTT TTGGCGAAGG TAACTTCACC GCCCTGTTCC AATCGATTGA ACGTGACCAA ATGCGCCGCG GCGTGCTGTA A
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Protein sequence | MASELNPLGL LGIEFTEFAS PDSDFMHKVF IDFGFSLLKK AKNKDILYYK QNDINFLLNN EREGFSAEFA KSHGPAISSM GWRVEDASFA HRVAVERGAK AVADSAKDLP YPAIYGIGDS LIYFIDTFGA DNNIYATDFE DLSEPVITQE KGFVEVDHLT NNVYKGTMEH WANFYKNIFG FTEVRYFDIS GVQTALVSYA LRSPDGSFCI PINEGKGNDK NQIDEYLKEY NGPGVQHLAF RSRDIVKSLD AMEGSSIQCL DIIPEYYDTI FDKVPQVTEN RERIKHHQIL VDGDESGYLL QIFTKNLFGP IFIEIIQRKN NLGFGEGNFT ALFQSIERDQ MRRGVL
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