| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2465 |
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| Symbol | |
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| ID | 4476646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2953556 |
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| End bp | 2954224 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639727063 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_870100 |
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| Protein GI | 117920908 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.523056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAATT TTCAATCACA TTTAGCGCAA AATCGCTATG ATAGACAGTT ATCATCCCCT
ATCGATATGG CTATGGAAAA CGATAGCACT ATTTCAACAG CCAATGAGCC AATCACAGAT
GCGGATCCTT TAGCGCGCGC CATTTTAAGA GTCGCGAATC AACGGGATAA AGCCGCCTTT
GCGGAATTGT TCAGCCATTT TATGCCCAAA ATTCGCGCAT TCGGTCTGCA ACGCTTAAAT
CAGCAAGGGC TGGCCATGGA TCTGGTGCAA GAAACCATGA CCTTAGTGTG GACCAAGGCC
CATTTGTACA ATGCCGACAA AGGCTCGGTC GCGACCTGGG TATTTACCAT TATGCGCAAC
CAGTGTTTCG ACATGCTCAG GCGTATCCAA CATAACCGTG AAGATGCCTT CGGGGATGAT
ATTTGGCCTA TTTACGATGT CGCCGTCAGT CAAGAAAACG GCCCTGATCA TAAACTCACC
GCCAAGCTAC TCGCGCATTT AGATTCCCTG CCCTTGCCTC AACGCCAAGT GGTTCAAGGG
ATCTATATGC AAGAGCTCAC GCAACAAGAA TTAGCCGATG CCTTAAAAGT CCCGATTGGC
ACGATAAAAT CGCGACTCAG ATTGGGGTTA GAAAAGCTGA AAAGCTTTTT GGAGACGCAA
CATGATTAA
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| Protein sequence | MENFQSHLAQ NRYDRQLSSP IDMAMENDST ISTANEPITD ADPLARAILR VANQRDKAAF
AELFSHFMPK IRAFGLQRLN QQGLAMDLVQ ETMTLVWTKA HLYNADKGSV ATWVFTIMRN
QCFDMLRRIQ HNREDAFGDD IWPIYDVAVS QENGPDHKLT AKLLAHLDSL PLPQRQVVQG
IYMQELTQQE LADALKVPIG TIKSRLRLGL EKLKSFLETQ HD
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