Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2459 |
Symbol | |
ID | 4476640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2948078 |
End bp | 2949370 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639727057 |
Product | lytic murein transglycosylase |
Protein accession | YP_870094 |
Protein GI | 117920902 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000623044 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGATCAAAC TGAAAGGAAT GTCCTATCTT GCCGCCAGCA TCGCCGCGTG TGTGAGCTTA AGTGCGTGTT CGAGCGCGCC AACATCGAGC GGTAATAGTC AAACCGCGAT CGCCGAGACG CAGGCCGCCG TGCAAGAAAT GCCGCTCAGT GACACCATCG CCGCCCATGC TGCGGCGTTT CCGACCTGTG TGGCTAACCT ACAGGAGCGC GCACGTACCG AAGGCTTATC CGAAGCCACT ATCCAAGACA CAGTCGCCAG TTTGCAGTTT GTGCCTAAAG TGATTGAGCT TGACCAAGCC CAGCCCGAGT TTAGCCAAAC CTTCAACAAC TATTTTACCA AGCGGGCGAC CGATTGGCGG GTGAATGAAG GCCGCCGTTT ACTGAAAAAA CACCGCGCGC TGCTCGATAA ATTGGCGCAG GAATACGGTG TACCGCCACA ATATATTCTG TCTTTCTGGG GGCTTGAGAC TAACTACGGT TCCTACAAAG GCAAAATGTC CGTGTTAGAT TCCCTTGCTA CCTTGGCCTG TGAGCCGCGT CGTAGTGGCT ATTTTACGAC TGAACTGATG CAAGCGCTTA AGTTAAAAGA AAAATACGGC TTTGATAAGA GCACTATGGT GGGCTCTTGG GCTGGCGCCA TGGGGCACAC CCAGTTTATG CCCTCGGCCT ATGCTAAATA TGCCATCGAT GGTGATGGCG ACGGTAAGGC CGATTTGTGG AATAGCACCG AAGATGCACT CACCTCGGCG GCGAACTTTT TGCAACACTT AGGCTGGCAA CGCAATGAGC GTTGGGGGCG TGAAGTGATA TTGCCGCGCA ATTTCAACTA TGAAAACCTT GGTGCCAAAC AGGCGCAGCC GCTATCCCAA TGGGCGGCGC AATCCGTAGT GCAAAGTAAT GGATTGCCTT TACCCGCTAT CAATATGAAG GCGGCGCTGT ATTTGCCCTC GGGTCATACT GGCCCCGCGT TTTTAGGCTA TGAGAACTTC AATGTGATCA TGCGTTGGAA CCGCTCTGAG TTTTACGCCA TTACCGTCGG TCATTTGGCC GATAGAATTA ATGGCGGCGA ACCACTAAAA GTGGCACCGC CCGAGCAGCC ACGTTTGAGT CGTGAGCAAA TCAAACAGTT ACAAACCAAG CTGAATGAAT CAGGCTTCGA TGTCGGAAAA CCAGACGGCG TACTTGGGCG TAACTCTTCG GCGGGGATCC AAGCATTCCA GCGCAGTAAG AATATGATTG CCGACGGTTT CCCAAGCCCT GAAGTCTTTA GCGCTCTGGG GATTTCACTC TAA
|
Protein sequence | MIKLKGMSYL AASIAACVSL SACSSAPTSS GNSQTAIAET QAAVQEMPLS DTIAAHAAAF PTCVANLQER ARTEGLSEAT IQDTVASLQF VPKVIELDQA QPEFSQTFNN YFTKRATDWR VNEGRRLLKK HRALLDKLAQ EYGVPPQYIL SFWGLETNYG SYKGKMSVLD SLATLACEPR RSGYFTTELM QALKLKEKYG FDKSTMVGSW AGAMGHTQFM PSAYAKYAID GDGDGKADLW NSTEDALTSA ANFLQHLGWQ RNERWGREVI LPRNFNYENL GAKQAQPLSQ WAAQSVVQSN GLPLPAINMK AALYLPSGHT GPAFLGYENF NVIMRWNRSE FYAITVGHLA DRINGGEPLK VAPPEQPRLS REQIKQLQTK LNESGFDVGK PDGVLGRNSS AGIQAFQRSK NMIADGFPSP EVFSALGISL
|
| |