Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2454 |
Symbol | ushA |
ID | 4477331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2941773 |
End bp | 2943494 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639727052 |
Product | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor |
Protein accession | YP_870089 |
Protein GI | 117920897 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAATA AGCTTATTAA AGGACTAATT GCGACTGCAG TGCTGGCTGC GCTAGCAGGT TGTAATAGTG ATGATGATAA TACTAAAGTA CCAACAACCT GCGCCGAAGC GGGCAGTGCT TGTAAAACTT TTACCGTATT ACACACCAAT GATAACCATG GCCGTTTCTG GGAAAACAGT GATGGCGAAT ATGGTATGGC AGCGCGTAAA GCGTTAATTG ATCAAATTCG TGCTGAAGTC AGCAAGAATG GCGGCCAAAC ATTATTATTG TCTGGCGGTG ATATTAACAC TGGCGTACCA GAATCTGATT TACAGGATGC GATTCCTGAC TTTACCGGTA TGAACAAAAT TGGTTACGAC GCAATGGCAG TCGGTAACCA TGAATTCGAT AACCCATTAT CTGTTTTAGA TATGCAGCGT CGTTTAGCCG AATTCCCAAT GCTGGCGGCG AACATTTACC GTAAAAATGC TGAGGGTGGT CAAGGTGAAC GTTATTTCGA GCCTTACAAA GTGTTCGATA TTAACGGTCT TAAAGTAGCT GTGATTGGTT TAACCACCGA AGACACTGCA AAAATCGGTA ACCCAGAATT TATCAGCGAT TTAATTTTCA CCGATCCTAA AGTGGAAGTG GCGAAAGTTA TTAAAGAAAT TAAAGACGCC AAAGCGGCTG ATATTATCTT CGCAACGACT CACATGGGTC ACTATGCCGA TGGCCAAAAC GGTAGCAACG CCCCAGGCGA CGTCGCTATG GCTCGTGCGT TGAATAAAGG CGACTTACAA GTTGTGATTG GTGGTCACTC ACAAAATCCA GTGTGTATGG AACCGGGTAC TGACAATACG TCTTATGCCG ACTTCAAACC TGGTGATAAC TGCGCGCCAG ATCAACAAAA CGGCACTTGG ATCATGCAAG CCCATGAATG GGGTAAGTAT GTTGGCCGTG CGGATTTCCA ATACTTCAAC GGCGAACTGC ATTTAGCCAG CTACAAGCTG ATCCCAGTTA ACATGCGTAA ACTGGACGAA GCAGGTAAGA AAACCACAGA GCTTGCTGGC ACTAAGATTG AGCCTGATGC TGAGTTAAAA GAGCTGCTGT CTTACTACCA AGAGAAAGGC CAAGCTAAGT TAGATGAAGT GATTGCGACT ACCGATGCGC TGCTCGATGG TGAACGTGCA AACGTACGTA ACAAGCAAAC CAACTTAGGC CGTATGTTAG CCATGGCGCA AAGCGGTAAA GTGTCTGCTG ACTTTGGTGT AATGAACTCA GGTGGTGTGC GCGCTTCTAT CCAAGCGGGC GACATTACTT ACCGTGACGT GCTGACGGTT CAACCTTTTG GCAACATGGT CACCCTGAAC GAAATGACGG GTACTGAAGT TGCAGCTTAC TTAGGCGCTG TGGGCAGTAT CCAAATCGGT TCAGGTGGTT ATGCCCAGAT CACTGGCGTA AAAATGACCA TCGACTGTGC GGCTAAGACG GCTAATATCA GCGAAATCAA TGGCAAAGAG TTCAGTGCGA CTGCAAGCTA TAAGTTCACT GTACCTAGCT TTAACGCTGC AGGTGGTGAC GGTTATCCAA AACTGGCTAG CCCAATCCAA ACAGGTTATG TAGATGCGGA CTTACTCTAT TCATTCCTGA AAGAGAAACA AGCAATCGTA GCTGCTGACT ACAACCCAGT GGGCGACATT GTTTACGAAA ACTCAAACAG TGTTGAAGGC TGTCAGCTGT AA
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Protein sequence | MTNKLIKGLI ATAVLAALAG CNSDDDNTKV PTTCAEAGSA CKTFTVLHTN DNHGRFWENS DGEYGMAARK ALIDQIRAEV SKNGGQTLLL SGGDINTGVP ESDLQDAIPD FTGMNKIGYD AMAVGNHEFD NPLSVLDMQR RLAEFPMLAA NIYRKNAEGG QGERYFEPYK VFDINGLKVA VIGLTTEDTA KIGNPEFISD LIFTDPKVEV AKVIKEIKDA KAADIIFATT HMGHYADGQN GSNAPGDVAM ARALNKGDLQ VVIGGHSQNP VCMEPGTDNT SYADFKPGDN CAPDQQNGTW IMQAHEWGKY VGRADFQYFN GELHLASYKL IPVNMRKLDE AGKKTTELAG TKIEPDAELK ELLSYYQEKG QAKLDEVIAT TDALLDGERA NVRNKQTNLG RMLAMAQSGK VSADFGVMNS GGVRASIQAG DITYRDVLTV QPFGNMVTLN EMTGTEVAAY LGAVGSIQIG SGGYAQITGV KMTIDCAAKT ANISEINGKE FSATASYKFT VPSFNAAGGD GYPKLASPIQ TGYVDADLLY SFLKEKQAIV AADYNPVGDI VYENSNSVEG CQL
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