Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2414 |
Symbol | |
ID | 4477222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2895136 |
End bp | 2896335 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639727011 |
Product | cystathionine beta-lyase |
Protein accession | YP_870049 |
Protein GI | 117920857 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.347428 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGATA AACATCAGCT AGCCACCCAA ATCGTCAGCG TCGGTCGAGA TAAAAAATGG ACCAAGGGCG TGATTAACCC GCCCGTATTT CGCGCATCCA CTATCGTCTT CGACACCATG GAAGACATGC GTCACGCCGC TAAAAACAAA ACCAATGGCG AAATGTTTTA TGGCCGCCGC GGCACCCCAA CCCATTTTGC GTTTCAGGCG GCGATCAGTG AGCTCGAAGG TGGCGCAGGT ACGGCGCTTT ATCCCTCGGG TGCGGCAGCG ATTAGCGCGG CTTTGTTATC GTTTTTACAG GCGGGCGATC ACCTCTTGAT GGTCGACAGT GTTTACGAGC CAACGCGAGA TCTCTGTAGC CATATTCTGG CGGGCTTTAA TATTGAGACC ACCTATTACG ATCCGCTAAT TGGTGAAGGC ATCCGCGAGC TTATTCGCCC CAATACTAAG GTGCTATTTT TAGAGTCTCC CGGCTCCATC ACCATGGAAG TGCAGGACGT CCCAACCCTA TGCCGTATCG CCCATGAACA TGGATTGGTG ACTATTCTCG ACAACACTTG GGCGTCGCCA ATCAATAGCA AGCCCTTCGA GATGGGTGTC GATGTGTCGA TTCAAGCCGC GACCAAATAT ATCGTCGGTC ACTCTGATGT GATGATAGGC ACCGCGACCG CCAACGAGAA GCACTGGCCG CAGCTGCGTG AGCGCAGTTA TTTATTGGGG CAAACCACCT CCCCCGACGA TGTGTATCTC GCTACGCGCG GATTACGCAC CCTAGGCGTG CGCATGGCGC AGCATGAGAA AAATGCCCTT AAAGTAGCTA ACTGGTTGAA AACGCGCCCC GAGGTTGATC ATTTACGTCA CCCCGCCTTT GATACCTGCC CTGGACATGA ATTCTTTAAA CGCGACTTTA GCGCCGCCAA CGGCCTGTTC TCCTTCGTGT TAAAGCAAGG GGATCAAGAA GCGGTCACCG CCCTCGTTGA AAATATGCAG CATTTTAAAA TGGGGTTTTC GTGGGGCGGT TATGAGAGTC TGATCCTAGG GATTTTCGGG ATTGAAAAAA TCCGCAGTGC CACTCAGTGG GATGCACGCA AGCCGTTGAT CCGTGTGCAT ATTGGCCTAG AAGATCCCGA TGATTTAATT GCCGATCTCA GCGCGGGCTT TGAGCGCTTT AATGCCGTAC TCGCCACCAA GGCCAAATAA
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Protein sequence | MTDKHQLATQ IVSVGRDKKW TKGVINPPVF RASTIVFDTM EDMRHAAKNK TNGEMFYGRR GTPTHFAFQA AISELEGGAG TALYPSGAAA ISAALLSFLQ AGDHLLMVDS VYEPTRDLCS HILAGFNIET TYYDPLIGEG IRELIRPNTK VLFLESPGSI TMEVQDVPTL CRIAHEHGLV TILDNTWASP INSKPFEMGV DVSIQAATKY IVGHSDVMIG TATANEKHWP QLRERSYLLG QTTSPDDVYL ATRGLRTLGV RMAQHEKNAL KVANWLKTRP EVDHLRHPAF DTCPGHEFFK RDFSAANGLF SFVLKQGDQE AVTALVENMQ HFKMGFSWGG YESLILGIFG IEKIRSATQW DARKPLIRVH IGLEDPDDLI ADLSAGFERF NAVLATKAK
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