Gene Shewana3_2387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2387 
Symbol 
ID4479622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2866785 
End bp2867651 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content51% 
IMG OID639726984 
Productalpha/beta hydrolase fold 
Protein accessionYP_870022 
Protein GI117920830 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0869571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.603358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCAAT CTTTCGCCCC CAAAAATCAA GTCGAGTTTG TGTTACCCCA TATCAAGCTC 
AGTGGTCGAT TATGGGGAGC GAAAGATAAG CCGTTATTGC TCGCGTTGCA TGGCTGGTTA
GACAATGCGA ACAGTTTTGA GCCTCTCGCT GAGTATTTGC CTCATTATCA GATACTTGCC
ATAGATTGGC CCGGTCATGG CTTTTCTGCA CATCGGCCGG GACATTATCC ATTGCATTGG
ATTGACTATT TATACGATCT CGATGCGTTA CTGGCGATGT TGCCGCAAAA GCCGCTGGCT
ATCATAGGGC ATTCGTTAGG GGGCATTATT GCCTCGGCGT ATACCGCGAC CTTTCCAGAA
AAGGTCAACA AACTGATTTT GATTGAGGCG TTAAGCCCAC TGTTTGAGTC GGCGACTCAA
GCGAAAACGC GGCTGCGAAA GAGTTTTTAT CAGCACGAGA AGTTTTTAGC GCAAAAGCAT
AAACAGCTAA AAGTCTACGA CAACATGGAC ACCGCAGTAA AAGCCAGAGT GCACTTGACG
GGGCTGGCGG AGCCTTGGTG CCGCTTGTTA CTCGAGCGCA ATATGCAACC AACCACCGAT
GGTGTTGCGT GGCGTAGCGA TCCAAGATTA AGGCTCGACT CGCCCATGCG GCTGACCTTT
GAGCAGGTTG ATGCACTGAT GCAGCATATT TCGGTCTCGA CCTTATTGAT CTGCGGCAAA
CAGGGTTTTA GCCAGCTGCA GGCGGCGCTG CCTAAGGCGA GGAAATGGTT CACACACTTG
TCAGAACATA TGCTCGAGGG CGACCACCAT GTGCACATGG ATAACGCCAA AGGGGTCGCG
CACTTGATCC AGCAGTTTGT CGAGTAA
 
Protein sequence
MWQSFAPKNQ VEFVLPHIKL SGRLWGAKDK PLLLALHGWL DNANSFEPLA EYLPHYQILA 
IDWPGHGFSA HRPGHYPLHW IDYLYDLDAL LAMLPQKPLA IIGHSLGGII ASAYTATFPE
KVNKLILIEA LSPLFESATQ AKTRLRKSFY QHEKFLAQKH KQLKVYDNMD TAVKARVHLT
GLAEPWCRLL LERNMQPTTD GVAWRSDPRL RLDSPMRLTF EQVDALMQHI SVSTLLICGK
QGFSQLQAAL PKARKWFTHL SEHMLEGDHH VHMDNAKGVA HLIQQFVE