Gene Shewana3_2377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2377 
Symbol 
ID4479612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2857409 
End bp2857909 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content48% 
IMG OID639726974 
Productpeptidyl-prolyl cis-trans isomerase B 
Protein accessionYP_870012 
Protein GI117920820 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.187419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.212978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTA TTTTTACAAC CAACCTAGGT GATATCAGTA TCGAACTCGA TATGGAGCGT 
GCGCCCGTTA CCGCCAAAAA CTTTATCCGC TACTGCCAGG AAGGTTTTTA TGAGCACACT
ATTTTCCATC GAGTGGTCAA AGGCTTTATG ATCCAAGGCG GTGGTTTTAC CGCCAAAATG
AAGGAAAAGC CCACCCACGA GCCGATTGTT AACGAAGCCA ATAAAGGCCT ATCGAATGTG
TTTGCCACAA TTGCCATGGC CCGCACCGAT GCACCGCACT CGGCAACCGC GCAGTTTTTT
ATCAATACGG CCAACAACGA GTTCCTCGAC CACACTGCAA CCACGAACAA CGGTTGGGGT
TATGCGGTAT TTGGTAAAGT CACCGCAGGA CTCGAGGTCT TGCTGCAAAT TGAAGGCGTA
AAAACCACCC GTGTTGCAGG CCATGAGGAC GTGCCCCGTG AGCCGATTAT TATCGAAAAA
GTGACTATTA TTGAAAAATA G
 
Protein sequence
MTIIFTTNLG DISIELDMER APVTAKNFIR YCQEGFYEHT IFHRVVKGFM IQGGGFTAKM 
KEKPTHEPIV NEANKGLSNV FATIAMARTD APHSATAQFF INTANNEFLD HTATTNNGWG
YAVFGKVTAG LEVLLQIEGV KTTRVAGHED VPREPIIIEK VTIIEK