Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2377 |
Symbol | |
ID | 4479612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2857409 |
End bp | 2857909 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639726974 |
Product | peptidyl-prolyl cis-trans isomerase B |
Protein accession | YP_870012 |
Protein GI | 117920820 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.187419 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.212978 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGATTA TTTTTACAAC CAACCTAGGT GATATCAGTA TCGAACTCGA TATGGAGCGT GCGCCCGTTA CCGCCAAAAA CTTTATCCGC TACTGCCAGG AAGGTTTTTA TGAGCACACT ATTTTCCATC GAGTGGTCAA AGGCTTTATG ATCCAAGGCG GTGGTTTTAC CGCCAAAATG AAGGAAAAGC CCACCCACGA GCCGATTGTT AACGAAGCCA ATAAAGGCCT ATCGAATGTG TTTGCCACAA TTGCCATGGC CCGCACCGAT GCACCGCACT CGGCAACCGC GCAGTTTTTT ATCAATACGG CCAACAACGA GTTCCTCGAC CACACTGCAA CCACGAACAA CGGTTGGGGT TATGCGGTAT TTGGTAAAGT CACCGCAGGA CTCGAGGTCT TGCTGCAAAT TGAAGGCGTA AAAACCACCC GTGTTGCAGG CCATGAGGAC GTGCCCCGTG AGCCGATTAT TATCGAAAAA GTGACTATTA TTGAAAAATA G
|
Protein sequence | MTIIFTTNLG DISIELDMER APVTAKNFIR YCQEGFYEHT IFHRVVKGFM IQGGGFTAKM KEKPTHEPIV NEANKGLSNV FATIAMARTD APHSATAQFF INTANNEFLD HTATTNNGWG YAVFGKVTAG LEVLLQIEGV KTTRVAGHED VPREPIIIEK VTIIEK
|
| |