| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2311 |
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| Symbol | |
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| ID | 4478068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2778452 |
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| End bp | 2780074 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639726906 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_869946 |
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| Protein GI | 117920754 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.679266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGT TAACTTGGTG GCGTGGAGCC GTGATCTATC AAATCTATCC ACGTAGCCTT
TTGGATACTA ATGGTGATGG CGTTGGCGAT CTGCGCGGTA TTATCACTAA GTTGGACTAT
ATTGCCAGCC TGAATGTGGA TGCGATTTGG ATTTCGCCAT TCTTTAAATC CCCGATGGCC
GACTTTGGTT ACGATATCAG TGACTACCGC GAGGTGGATC CTCTGTTTGG CACTATGCAG
GATTTTGATG AACTGATTGA AAAAGCCCAT CAACGTGGCA TTAAAGTCAT TATCGACCAA
GTGCTAAGCC ATACCTCAGA TCAACATGCG TGGTTTTGTG AGAGTCGCGA GAGCCGCACC
AATCCCAAGG CAGATTGGTA TGTGTGGGCC GAACCAAAGG AAGATGGTAC GGCGCCAAAC
AACTGGTTAG CGATTTTCGG CGGTTGCGCC TGGGAGTGGG AGCCGCGCAG ACAACAATAT
TATCTGCACA ACTTTTTACG CAGCCAACCC GATATCAACT TCCACAATCC CGACGTGCGT
CAAGCCGTGT TAGATAATGT GGAGTTTTGG CTGAAGAAGG GCGTCGATGG TTTCCGCTTA
GATGCCATTA CCTTCTGTTA TCATGATGAA CAGCTTAGGG ATAATCCGCC CAAACCCAAG
GATAAACGCC AAGGGCGCGG ATTCAGTGAA GATAATCCCT ATGCCTATCA GTACCATTAC
TACAATAACG ATAGACCGCA AACGATTCTA TTTATTGAAG AATTACGCCA GTTAATCAAT
CGCTATCCAG GTGCTGTGAC CTTAGGGGAA GTCTCCGCCG AGGATTCACT TGCGGTGATG
GCCGCCTATA CCAAGGGCGA AGACCGCTTA CATATGGCCT ACAGTTTCGA GCTGCTGACC
GATGACTATA GCGCCGCTTA TATTCGCCAA ACGGTAGAAG CACTGGAAGC GAGTATTGGT
GATGGTTGGC CCTGCTGGGC GATAGGTAAT CACGATGCAC AGCGCGTCGC CAGCCGTTGG
GGACGTGGTA AGCAAACATC CGACATGGTG AAAATGCTCA ATGCCATGGT TAACTCACTG
CGAGGCAGTG TCTGTAGCTA TCAAGGAGAA GAGCTGGGTT TAACCGAAGC GCCGATTGAA
TACCACGAGT TGCAGGATCC CTTCGGCAAA ACCTTCTGGC CAATGTTTAA GGGCCGTGAT
GGCTGCCGTA CACCTATGCC GTGGGAGCAA AATGCAGATT TTAGCGGCTT TAGCCAAGTG
ACACCTTGGT TGCCTATCGC GCAGGCGCAC AGAGCACTGG CGGTTGATGT GCAGGAAGCC
GATAGCCAAT CGATGTTACA TGGCTATCGT CAGTTCCTCG CATGGCGCAA AGGCTATCCC
GCTTTGGTTG AAGGGGAAAT TGAATTCCTC GATGCGCCAG AACCCTTGTT GGTGTTTGTG
CGTACGTCCG GGGAGCAAAA GCTACTGGTG TGCTTTAACC TACAAGATAC AGAGCAGGCA
TTATCACTGG ATGCACTCAG CATCCAGCAA GAAATTACCG GTCACGGTTT GAAAACTGCG
CAAAGGATCG CCGACACATT GACATTTTCG GCCTATGCCT GCTTTTATGC GTTGTTGAAC
TAG
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| Protein sequence | MSELTWWRGA VIYQIYPRSL LDTNGDGVGD LRGIITKLDY IASLNVDAIW ISPFFKSPMA
DFGYDISDYR EVDPLFGTMQ DFDELIEKAH QRGIKVIIDQ VLSHTSDQHA WFCESRESRT
NPKADWYVWA EPKEDGTAPN NWLAIFGGCA WEWEPRRQQY YLHNFLRSQP DINFHNPDVR
QAVLDNVEFW LKKGVDGFRL DAITFCYHDE QLRDNPPKPK DKRQGRGFSE DNPYAYQYHY
YNNDRPQTIL FIEELRQLIN RYPGAVTLGE VSAEDSLAVM AAYTKGEDRL HMAYSFELLT
DDYSAAYIRQ TVEALEASIG DGWPCWAIGN HDAQRVASRW GRGKQTSDMV KMLNAMVNSL
RGSVCSYQGE ELGLTEAPIE YHELQDPFGK TFWPMFKGRD GCRTPMPWEQ NADFSGFSQV
TPWLPIAQAH RALAVDVQEA DSQSMLHGYR QFLAWRKGYP ALVEGEIEFL DAPEPLLVFV
RTSGEQKLLV CFNLQDTEQA LSLDALSIQQ EITGHGLKTA QRIADTLTFS AYACFYALLN
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