| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2283 |
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| Symbol | |
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| ID | 4478040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2745028 |
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| End bp | 2745753 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639726878 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_869918 |
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| Protein GI | 117920726 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000130955 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTAAGTA ATATTCGTGT GATTTTAGTG GGGACATCGC ACCCCGGCAA TATTGGTTCG
ACCGCCAGAG CGATGAAGAC CATGGGGTTA TCGACCCTGT ATCTTGCCGA ACCAAGATGT
GAAGTGGATG GTCAATCCAT TGCCTTGGCC GCTGGTGCAT CGGACATTTT AAAACATTTG
GTGAAAGTGG ATTCCTTAGA GGAAGCCATC GCCGATTGCA GTTTAGTAAT TGCCACCAGT
GCCCGCAGCC GTACCTTAGA TTGGCCAATG CTCGACCCGC GTGAAGCGGG GCAAAAGCTG
GTCACTGAGG GCTTAACAGG GCCTGTCGCC ATTGTCTTTG GCCGTGAAAA TCATGGTTTG
ACCAATGAAG AATTACAGCA ATGTACATAT CATGTGGCTA TTCCTGCTAA CCCTGAATAC
AGCTCATTGA ATTTAGCGCA AGCAGTGCAG ATCATTTGTT ATGAGACGCG TGTGGCACAC
TTAGCGCAAA CTGAGGCGCC TCAAGTGGAG GAAGAGTATC CGCTTTCTGC CGATCTCGAG
CGTTTCTTTG TGCACTTAGA AAGCACCTTA TCATCGACAG GTTTTATTAT TAAAAACCAC
CCCGGCCAAG TGATGACTAA GCTACGTCGT CTGTTTAGCC GTGCACGTAT CGAAAGCCAA
GAGATGAACA TTCTTCGAGG CATTTTAACC TCGATAGATA AAGTGGTGGG TAACAAACAA
AAATAG
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| Protein sequence | MLSNIRVILV GTSHPGNIGS TARAMKTMGL STLYLAEPRC EVDGQSIALA AGASDILKHL
VKVDSLEEAI ADCSLVIATS ARSRTLDWPM LDPREAGQKL VTEGLTGPVA IVFGRENHGL
TNEELQQCTY HVAIPANPEY SSLNLAQAVQ IICYETRVAH LAQTEAPQVE EEYPLSADLE
RFFVHLESTL SSTGFIIKNH PGQVMTKLRR LFSRARIESQ EMNILRGILT SIDKVVGNKQ
K
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