Gene Shewana3_2250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2250 
Symbol 
ID4477675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2711588 
End bp2712895 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content46% 
IMG OID639726845 
Productmethyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 
Protein accessionYP_869885 
Protein GI117920693 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.32107 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTGGT GGAAAGTTAA ATCAAATAAC AGGGATGCGA ACAACCATTC ATCAGGTTTT 
ACAGCAGCCG AAACGCTTGA GAATGAACTG GCGGCGATTC GTGCCTACAC TGCCTATATT
TGTTTCACAC CTAAGGGTGA AATCATTGAA GCCAATGATA TTTTCTTAGA TGTAATGGGT
TACAGTGCCA ATGAAATCCT TGGTAAACAC CATAGAATGT TTTGTACGGC ACAATACTCG
GGCTCGCAGG AATATCAAAA GTTTTGGCAG GAACTTGCTG CAGGCAATGC GTTTACGGGG
ACATTCCAAC GTTTAAAGAA AAACCACATC CCAGTTTATG TCGAGGCCAG TTATTTCCCC
GTAAAAAACA GTGCGGGTGA CGTCGTGAAA ATCATCAAAA TCGCCAATGA TGTTACGGCG
TCACAACTTA ACCTCATTGC TAAAAATGCC ATTCTCGATG CCCTCGATCG CTCCCAAGCC
GTTATTGAGT TTTTACCCGA TGGCACAGTG ATCACCGCGA ATCAAAACTT CTTGGATATC
ATGCATTACC GACTAGATGA GATCCAAGGT AAACACCATA AGATGTTCTG TGACAAAGAG
TTTTACCGTA TTAGACCCGA CTTTTGGAAA CGACTCGCCG CAGGCGAACA CTTCACCGGA
CGCTTTAAAC GCATCGATGC ACATAACAAT GTGATTTGGC TTGAAGCCAC CTACAATCCG
ATCTGGGATG CATCAAATAA GGTGTATAAG ATTGTTAAGT TTGCCTCGGA TATCTCCCAT
AGGGTCAATA CCGCCCTGCA AGCGGTGGAC ATGGCGGCGG CGACGTCAGA GCAAACCTCA
CAAATCACCA CAAATGCAGT GCAAGTGCTG AACGAAGCCG TCTGTACTTC GCATCAAATT
GCCGAACAAG TTAAAAATGC CTCGAATATT GGTGGTGAGC TACTCGTACA ATCAAAAAAT
ATCAACGACA TAGTGATCAC CATCCGTGGC ATTGCAGAAC AAACCAATTT ACTGGCTCTC
AATGCGGCGA TTGAGGCAGC AAGAGCGGGC GATCTTGGGC GAGGTTTTGC CGTCGTAGCC
GATGAGGTCA GAAAGTTAGC CTCTCGCACC TCCACGGCGA CCAGCGAAAT CGCGAATGTG
GTTCAACAAA ATACCGACCT AATCAAAAAC ATCGATCATC AACTGAGCAA CATCACCAAT
GTGGCATTGC ATGGGGAGGA CAGTATCAAT CATGTCGCCG CTGGCCTTGC CGATGTCGGC
AATGGTGTCA GCCAATTTGT CGCTATGGTT GAACAGCTGA GGCCCTAA
 
Protein sequence
MFWWKVKSNN RDANNHSSGF TAAETLENEL AAIRAYTAYI CFTPKGEIIE ANDIFLDVMG 
YSANEILGKH HRMFCTAQYS GSQEYQKFWQ ELAAGNAFTG TFQRLKKNHI PVYVEASYFP
VKNSAGDVVK IIKIANDVTA SQLNLIAKNA ILDALDRSQA VIEFLPDGTV ITANQNFLDI
MHYRLDEIQG KHHKMFCDKE FYRIRPDFWK RLAAGEHFTG RFKRIDAHNN VIWLEATYNP
IWDASNKVYK IVKFASDISH RVNTALQAVD MAAATSEQTS QITTNAVQVL NEAVCTSHQI
AEQVKNASNI GGELLVQSKN INDIVITIRG IAEQTNLLAL NAAIEAARAG DLGRGFAVVA
DEVRKLASRT STATSEIANV VQQNTDLIKN IDHQLSNITN VALHGEDSIN HVAAGLADVG
NGVSQFVAMV EQLRP