| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2236 |
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| Symbol | |
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| ID | 4478632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2688936 |
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| End bp | 2690861 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639726831 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_869871 |
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| Protein GI | 117920679 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0654901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.264875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCAACC CATTGACAAA GATGGTGTTA TCCAGCGCAA TTATCATCGC AGGGGCATTT
AATGCCTCTG CGGCTTTCGC GTTAACTTCT ACCCAGAAGA CCTTTCTTGA GGCTGAAAAA
GCCCTAAAGA AACAAGACTA TGCCACCTAC AAGCCCCTGC GAGCTAAGTT AGGCGATTAT
CCGCTGGCGA TTTATCTCGA CCATGATATC GACATTGGCA AGCTTAACGA TTTACGCGGC
AACGACGCTA AGGCCATGAT AGATAAGTAT CAAACCACGC CTATGTATCA GCGCCTGCGT
TCAAAATATT TATTAAATGC CGGCGGCCAA AAGCGTTGGA ACGACTTTTT GAGCCTCGCC
CAAGACGCGC CGACCGATGT CAGGCTGCAG TGTTATTTCT ATGAGGCCAA ACTCGCCAAG
GGCGAAACCC AAACCGCCTA CACGGCGGCG CAGTCACTTT GGGTCTATGG CGATTCCCGT
CCCAAGGAAT GCGATCCCCT CTTCAATGCC TGGACCAAAG CCGGTAAGCG CACTCAGGAT
GTGATTTGGG CGCGGATGTT ACTGAGCTTC GATGAGGGCC AAACCAGCCT GCTGAGTTAC
CTATCGCAAA AAATCACCGT GCATAGCGCA GAGGCAAAAC GCTTAGTGGC GGTGTTTAAA
GACCCCAATA GCCTGCGCCA TACCGAAAAA TTTAAGGACA AAAATCCTAT CGTTGGCGAT
ATCGTCGCCG CAGGCTTAAA ACGCCTTGCC CGTAAGGATC TCGACCAAGC CATTAATTTA
TATACTCGGT ATCAAAAAGC GAAACGCTTT ACTCCAGCTC AGGATCAACA GCTGCAAAAG
TATCTAGTAC GCCGCGTGTT GATTGAGCAG GATGATAATT TTAAAGACTG GGCCGATAAC
CTGCTGCCCG AGATGAAGAG CGATGATATG TTCGAGCGCC GCTTACGCTG GGCGATCCGC
GAGCAGGACA GCACCCATAT CGCGCGCTAC TTAGATTTAT TATCGCCAGA AAGCGCAGCC
AAAGAGCGCT GGCAGTATTG GCTGTATCGC ACTAACGCGA AACACGCTCC CGAAAGCGCC
ACTAAGGCGT TAGCAGCTGT CAGTAATGAG CGCAACTTTT ACGGTTTTGC CGCATCGCAG
TTATTGAATA AGCCCGTGTC CTTAAATCAA AGCCCTGAGC CTGTGGTGGA TGGGACCAGT
CAAAAACTCG AAGACGATTT AGGCTTTGTG CGCGTACTGG AGTTGATGGC GCTGGATCGT
TACTTCGATG CCCGTTATGA ATGGGTCGCC CTACTAAAGC GCAGCAATAA TGAGATGCGC
GCCCGCTATG GTCGTTATGC CCACGATCAA GGCTGGTATG ACTTTGGCGT AGAAGCCAGT
ATTCAAGGCA AGCTCTGGGA TGATATTCCC CTGCGCTTCC CGATGGCACA TCAGTCAGGC
TTCGAACACG CCAGTAAAAA GCACAAGGTC AACATTGATG AAATCCGCGC CATTAGCCGC
CGCGAAAGTG CGTTTTTCCT CTATGCGACC TCAGGTGTCG GCGCCCGCGG TTTAATGCAG
ATTATGCCCG CAACAGCCAA GGCTACCGCG AAGAAACACG GGGCTAAGTA CAGCGATCCT
AAGGATCTCT ACAGCGCCGA GCTGAACTTA AACTTAGGCA GTGCCTATTA CGCACAATTG
TTGAAGGATT TCAATCAAAA CCGCGTGTTA GCAACCGCCG CCTATAACGC TGGCCCCTCG
AGGGTTCGCC GCTGGTTAGC GGAGTCGAAT GGAAAGCTCG ATGCCATGAG TTTTATCGAG
TCCATTCCCT TCACCGAAAC CCGTGAATAT GTGCAAGCCG TGTTAAGTTA TCGGTTGATT
TACGAGGCGC AAAAACAAAA GCCACAGCCT TTATTTAATG AGGCTGAGCT TAAGTTCCAT
TACTAA
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| Protein sequence | MCNPLTKMVL SSAIIIAGAF NASAAFALTS TQKTFLEAEK ALKKQDYATY KPLRAKLGDY
PLAIYLDHDI DIGKLNDLRG NDAKAMIDKY QTTPMYQRLR SKYLLNAGGQ KRWNDFLSLA
QDAPTDVRLQ CYFYEAKLAK GETQTAYTAA QSLWVYGDSR PKECDPLFNA WTKAGKRTQD
VIWARMLLSF DEGQTSLLSY LSQKITVHSA EAKRLVAVFK DPNSLRHTEK FKDKNPIVGD
IVAAGLKRLA RKDLDQAINL YTRYQKAKRF TPAQDQQLQK YLVRRVLIEQ DDNFKDWADN
LLPEMKSDDM FERRLRWAIR EQDSTHIARY LDLLSPESAA KERWQYWLYR TNAKHAPESA
TKALAAVSNE RNFYGFAASQ LLNKPVSLNQ SPEPVVDGTS QKLEDDLGFV RVLELMALDR
YFDARYEWVA LLKRSNNEMR ARYGRYAHDQ GWYDFGVEAS IQGKLWDDIP LRFPMAHQSG
FEHASKKHKV NIDEIRAISR RESAFFLYAT SGVGARGLMQ IMPATAKATA KKHGAKYSDP
KDLYSAELNL NLGSAYYAQL LKDFNQNRVL ATAAYNAGPS RVRRWLAESN GKLDAMSFIE
SIPFTETREY VQAVLSYRLI YEAQKQKPQP LFNEAELKFH Y
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