| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2223 |
|---|
| Symbol | |
|---|
| ID | 4478619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 2670680 |
|---|
| End bp | 2673394 |
|---|
| Gene Length | 2715 bp |
|---|
| Protein Length | 904 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639726818 |
|---|
| Product | CoA-binding domain-containing protein |
|---|
| Protein accession | YP_869858 |
|---|
| Protein GI | 117920666 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1042] Acyl-CoA synthetase (NDP forming) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.652784 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAC GTACATTACA CTCCTTATTT AAACCCACAT CCGTAGCCAT TATTGGCGCC
TCCAATAGTG AGAAACGCGC CGGTAATGTG CTGATGAAAA ACCTGCTCTC GAGCGGATTT
TCTGGCCCCA TCATGCCCGT GACGCCAAAA TACCGCGCCG TGATGGGTGT GCTTGCCTAT
CCCAATATTG AAGCCTTGCC GATAAAGCCC GATCTGGCAG TCATCTGTAC CCGCGCCAGT
CGCGTGCCCG CCATCGTCGA AACCCTGGCG CAATTCGGCT GTAAGGTGGC GATTATCATG
GCCTCCGGCA TGGCGCAGGA GATGAATGAA GAAGGTGTCA GCCTGCTCAA CTTGGCCATG
CAACATGCAA AACGCTACGG CATGCGCATT CTTGGCCCCA ATAGTTTGGG GATGTTGTTA
CCGCCGTTAG GGCTCAATGC CAGTTTGGCC CACGCCAGCG CCCTGCCCGG CAAAATTGCT
TTTGTGTCGC AGTCTGCGGC GATTTGTACC ACGGTACTGG ATTGGGCCAA CAACAAAGGT
ATTGGCTTTT CATCCTTTAT CTCCCTTGGG GATGCCACCG ATATTAACTT CGATGAATTG
CTCGATTTCC TCGGCCGTGA TAGCCGTACT AGTGCCATCA TGTTGTATAT CGACTCTGTC
AATGAGAAAC GCCATTTTCT CTCTGCCGCC CGCGCAGCCT CCCGCAATAA GCCCATATTA
GTGATTAAAT CCGGTCGCAG CGCCGAAGGA GTGCGGGCTG CCAAGTTGCA TACGGGTGGC
ATTGGCGGTA ACGATGCCGT GTACGAAGCC GCCTTTAGGC GCGCAGGTAT GCTGCGGGTA
AATGATTTAA TTGAACTTTT TGCCGCGGTA GAAAGCCTCG CCCACTCTAA TCCATTGCAG
GGCGAGCGAT TAGGGATTAT CAGTAATGGT GGCGGCCCAG CGGTATTGGC CGTCGATGAA
CTTATTCTGC GCGGCGGTAA ACTGGCGGAA TTATCCCAAG AGACCATCGC CAAACTCGAT
GCCGTGTTGC CCAATACGTG GTCGAAACAA AACCCCGTCG ACATTATCGG CGATGCCAAC
GCCAGCCGTT ACGCCAGCGC ACTCAATATC CTGATGGATT GTGAAGAATT AGACGCCATT
TTGGTGCTGC ATTCGCCGTC CGCCCTTGGT GAAAGTGTCG AGATTGCCGA TGCCTTAATT
AAAGTGATCC ACGCGCATCC GAAGAAAAAC CGCTTAAATA TCCTCACCAA CTGGAGCGGT
GAAGACTCGG CCTATCAAGC CCGCAAACGC TTTACCAAGG GCGGCATCTC CACCTATCGC
ACCCCCGAAG GTGCAGTCGG CGCCTTTATG CATATGGTGG AATATCGCCG TAACCAAAAA
CTGTTGCAGG AAGTGCCGCA GTCGATCCCC GACAATATTC CGACCGATAG CCAAACGGCG
CGAAAACTGC TGCAAGCGGC ACAGGCCAAG GGCAAAGCGG TACTCGAAAC CCACGAGGCC
AGCCCGATTT TACGCGCCTA TGGCCTCAAT ACTATCGACA CTTGGTTTGT CAAAGATGCC
GATGAGGCCG TCGCTATTGC CAATGAGGCG GGTTATCCCC TCGCGCTCAA GGTGCAATCG
CCGAATATTT TGCATAAATC CGATGTCCAC GGCGTCATGC TTAACCTCAC CTCGGCGGAA
GATATTCGCC ATGCCGCCAA CGCAATCACC CAGCGGGTAC ATCAGGCCAA TCCCGACGCG
ATTATCGAGG GCATGATAGT GCAGAAGATG GCCTTGACCG CAGGCGCGCA GGAAATTCGG
GTCGCCGTGA TTAGCGATCC CGTCTTCGGT CCGGCCATCT GTTTAGGTGA AGGCGGCTCG
GAGTGGGATC CGACTCAAGA TGCTGCGGTC GCCTTGCCGC CACTCAATAT GGCGCTGGCC
CGTTACATGG TGATCCAAGC CTTAAAGACC CATAAATTAA AGGACAGGCA TTTACCACTG
GGGCTGGATA TGAACGCCCT ATGCGTGATG CTGACGCAAA TTTCCCACAT CATCATTGAC
TGCCCAGAAA TAGCATCGTT AGATCTTAAC CCTGTGCTGG CGGCGGGAGA AAACATCACC
CTGCTCGATG TGAATATCCG TCTGCACGAT GCCAATACCG ATAACACCTC GCGTCTTGCC
ATCATGCCCT ATCCCAAGGA ATTAGAGGAG TTTGCCGAGC TTAAAAATGG TCTTAAGGTC
ATGCTGCGTC CGATCCTGCC CGAGGATGAG CCCAAGCATT TGGCCTTTGA TAATTCCCTC
TCCGATGAAG ACAGGTACAA ACGCTACTTT GGCGTGCGCT CTAAGATGAC CCACGAGGAA
ATGGCGGTAC TGACCCAAAT CGACTATGCC CGCGAAATGG CGTTTATCGC CACCGCCAAG
GGACCGGACG GTGATGACAT CACCCTAGGT GCGGTCAGGG CCTCCATCGA TCCCGACAAT
ACCGAAGCCG AATTTGCCAT GGCGGTACGG GGCGATCACC AAGGTATTGG GCTGGGTAAA
TTACTGCTCG AAAAATTGAT TAAATACTAT CAAGCCAATG ACACCCCAGT GCTAACGGGC
TTTACCATGT TTGAAAACCG CAATATGGCA AGCCTTGCCA AGAGCTTAGG CTTTAAGGTT
ACCTTCGATA TGGAAGAACA TTTGATCAAA ATGCATATGG ATCTTAAGGC GCCCAACGCC
AATAAGAGTC AATAG
|
|---|
| Protein sequence | MSQRTLHSLF KPTSVAIIGA SNSEKRAGNV LMKNLLSSGF SGPIMPVTPK YRAVMGVLAY
PNIEALPIKP DLAVICTRAS RVPAIVETLA QFGCKVAIIM ASGMAQEMNE EGVSLLNLAM
QHAKRYGMRI LGPNSLGMLL PPLGLNASLA HASALPGKIA FVSQSAAICT TVLDWANNKG
IGFSSFISLG DATDINFDEL LDFLGRDSRT SAIMLYIDSV NEKRHFLSAA RAASRNKPIL
VIKSGRSAEG VRAAKLHTGG IGGNDAVYEA AFRRAGMLRV NDLIELFAAV ESLAHSNPLQ
GERLGIISNG GGPAVLAVDE LILRGGKLAE LSQETIAKLD AVLPNTWSKQ NPVDIIGDAN
ASRYASALNI LMDCEELDAI LVLHSPSALG ESVEIADALI KVIHAHPKKN RLNILTNWSG
EDSAYQARKR FTKGGISTYR TPEGAVGAFM HMVEYRRNQK LLQEVPQSIP DNIPTDSQTA
RKLLQAAQAK GKAVLETHEA SPILRAYGLN TIDTWFVKDA DEAVAIANEA GYPLALKVQS
PNILHKSDVH GVMLNLTSAE DIRHAANAIT QRVHQANPDA IIEGMIVQKM ALTAGAQEIR
VAVISDPVFG PAICLGEGGS EWDPTQDAAV ALPPLNMALA RYMVIQALKT HKLKDRHLPL
GLDMNALCVM LTQISHIIID CPEIASLDLN PVLAAGENIT LLDVNIRLHD ANTDNTSRLA
IMPYPKELEE FAELKNGLKV MLRPILPEDE PKHLAFDNSL SDEDRYKRYF GVRSKMTHEE
MAVLTQIDYA REMAFIATAK GPDGDDITLG AVRASIDPDN TEAEFAMAVR GDHQGIGLGK
LLLEKLIKYY QANDTPVLTG FTMFENRNMA SLAKSLGFKV TFDMEEHLIK MHMDLKAPNA
NKSQ
|
|---|
| |